Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Herc1E9PZP8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Herc1E9PZP8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC10.76□□□□□ -0.69
Herc1E9PZP8 Gm10576-201ENSMUST00000191927 825 ntBASIC10.76□□□□□ -0.69
Herc1E9PZP8 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC10.76□□□□□ -0.69
Herc1E9PZP8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC10.76□□□□□ -0.69
Herc1E9PZP8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Herc1E9PZP8 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Herc1E9PZP8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Herc1E9PZP8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Herc1E9PZP8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Herc1E9PZP8 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Herc1E9PZP8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Herc1E9PZP8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Herc1E9PZP8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Herc1E9PZP8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Herc1E9PZP8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Herc1E9PZP8 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Herc1E9PZP8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Herc1E9PZP8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Herc1E9PZP8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Herc1E9PZP8 Gm13884-201ENSMUST00000118103 829 ntBASIC10.75□□□□□ -0.69
Herc1E9PZP8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Herc1E9PZP8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Herc1E9PZP8 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Herc1E9PZP8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC10.75□□□□□ -0.69
Herc1E9PZP8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC10.75□□□□□ -0.69
Herc1E9PZP8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Herc1E9PZP8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Herc1E9PZP8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Herc1E9PZP8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Herc1E9PZP8 Gm28659-201ENSMUST00000188013 759 ntBASIC10.75□□□□□ -0.69
Herc1E9PZP8 Gm29518-201ENSMUST00000190858 372 ntBASIC10.75□□□□□ -0.69
Herc1E9PZP8 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Herc1E9PZP8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Herc1E9PZP8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC10.75□□□□□ -0.69
Herc1E9PZP8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Herc1E9PZP8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC10.74□□□□□ -0.69
Herc1E9PZP8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC10.74□□□□□ -0.69
Herc1E9PZP8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC10.74□□□□□ -0.69
Herc1E9PZP8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Herc1E9PZP8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Herc1E9PZP8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Herc1E9PZP8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Herc1E9PZP8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Herc1E9PZP8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Herc1E9PZP8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Herc1E9PZP8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Herc1E9PZP8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Herc1E9PZP8 Gm43672-201ENSMUST00000199072 1731 ntBASIC10.74□□□□□ -0.69
Herc1E9PZP8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Herc1E9PZP8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Herc1E9PZP8 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC10.74□□□□□ -0.69
Herc1E9PZP8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Herc1E9PZP8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Herc1E9PZP8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Herc1E9PZP8 Gm8097-201ENSMUST00000117903 829 ntBASIC10.73□□□□□ -0.69
Herc1E9PZP8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Herc1E9PZP8 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Herc1E9PZP8 Gm9449-201ENSMUST00000207265 1011 ntBASIC10.73□□□□□ -0.69
Herc1E9PZP8 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Herc1E9PZP8 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Herc1E9PZP8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Herc1E9PZP8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Herc1E9PZP8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Herc1E9PZP8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Herc1E9PZP8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Herc1E9PZP8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Herc1E9PZP8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Herc1E9PZP8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC10.73□□□□□ -0.69
Herc1E9PZP8 Mir6236-201ENSMUST00000184437 123 ntBASIC10.73□□□□□ -0.69
Herc1E9PZP8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Herc1E9PZP8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Herc1E9PZP8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Herc1E9PZP8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Herc1E9PZP8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Herc1E9PZP8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Herc1E9PZP8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Herc1E9PZP8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC10.73□□□□□ -0.69
Herc1E9PZP8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Herc1E9PZP8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Herc1E9PZP8 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Herc1E9PZP8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Herc1E9PZP8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Herc1E9PZP8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Herc1E9PZP8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Herc1E9PZP8 Gm42699-201ENSMUST00000198104 1657 ntBASIC10.72□□□□□ -0.69
Herc1E9PZP8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Herc1E9PZP8 Gm42418-201ENSMUST00000182010 1831 ntBASIC10.72□□□□□ -0.69
Herc1E9PZP8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Herc1E9PZP8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Herc1E9PZP8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Herc1E9PZP8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Herc1E9PZP8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Herc1E9PZP8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Herc1E9PZP8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Herc1E9PZP8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Herc1E9PZP8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Herc1E9PZP8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Herc1E9PZP8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms