Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv30A0A0B4J1P1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.19□□□□□ -0.14
Trbv30A0A0B4J1P1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv30A0A0B4J1P1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trbv30A0A0B4J1P1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv30A0A0B4J1P1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv30A0A0B4J1P1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Trbv30A0A0B4J1P1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv30A0A0B4J1P1 Reep4-203ENSMUST00000226563 1444 ntBASIC14.18□□□□□ -0.14
Trbv30A0A0B4J1P1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv30A0A0B4J1P1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
Trbv30A0A0B4J1P1 Gm18671-201ENSMUST00000214826 683 ntBASIC14.18□□□□□ -0.14
Trbv30A0A0B4J1P1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv30A0A0B4J1P1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv30A0A0B4J1P1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trbv30A0A0B4J1P1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv30A0A0B4J1P1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.18□□□□□ -0.14
Trbv30A0A0B4J1P1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv30A0A0B4J1P1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv30A0A0B4J1P1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv30A0A0B4J1P1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv30A0A0B4J1P1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Trbv30A0A0B4J1P1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv30A0A0B4J1P1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv30A0A0B4J1P1 Golph3-202ENSMUST00000226517 2359 ntBASIC14.17□□□□□ -0.14
Trbv30A0A0B4J1P1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv30A0A0B4J1P1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trbv30A0A0B4J1P1 Gm13234-201ENSMUST00000120010 747 ntBASIC14.17□□□□□ -0.14
Trbv30A0A0B4J1P1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.17□□□□□ -0.14
Trbv30A0A0B4J1P1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
Trbv30A0A0B4J1P1 Gm38205-201ENSMUST00000192243 258 ntBASIC14.17□□□□□ -0.14
Trbv30A0A0B4J1P1 Gm42642-201ENSMUST00000200683 355 ntBASIC14.17□□□□□ -0.14
Trbv30A0A0B4J1P1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv30A0A0B4J1P1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trbv30A0A0B4J1P1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv30A0A0B4J1P1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv30A0A0B4J1P1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv30A0A0B4J1P1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv30A0A0B4J1P1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.17□□□□□ -0.14
Trbv30A0A0B4J1P1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv30A0A0B4J1P1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv30A0A0B4J1P1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Trbv30A0A0B4J1P1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv30A0A0B4J1P1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv30A0A0B4J1P1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv30A0A0B4J1P1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv30A0A0B4J1P1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trbv30A0A0B4J1P1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trbv30A0A0B4J1P1 Gm8495-201ENSMUST00000188740 694 ntBASIC14.16□□□□□ -0.14
Trbv30A0A0B4J1P1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv30A0A0B4J1P1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv30A0A0B4J1P1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv30A0A0B4J1P1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trbv30A0A0B4J1P1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv30A0A0B4J1P1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trbv30A0A0B4J1P1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.16□□□□□ -0.14
Trbv30A0A0B4J1P1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Trbv30A0A0B4J1P1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.15□□□□□ -0.14
Trbv30A0A0B4J1P1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv30A0A0B4J1P1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv30A0A0B4J1P1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv30A0A0B4J1P1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv30A0A0B4J1P1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv30A0A0B4J1P1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trbv30A0A0B4J1P1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv30A0A0B4J1P1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv30A0A0B4J1P1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv30A0A0B4J1P1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv30A0A0B4J1P1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv30A0A0B4J1P1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trbv30A0A0B4J1P1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv30A0A0B4J1P1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv30A0A0B4J1P1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv30A0A0B4J1P1 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.15□□□□□ -0.14
Trbv30A0A0B4J1P1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv30A0A0B4J1P1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trbv30A0A0B4J1P1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trbv30A0A0B4J1P1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv30A0A0B4J1P1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv30A0A0B4J1P1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv30A0A0B4J1P1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trbv30A0A0B4J1P1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv30A0A0B4J1P1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.14□□□□□ -0.15
Trbv30A0A0B4J1P1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv30A0A0B4J1P1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv30A0A0B4J1P1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv30A0A0B4J1P1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv30A0A0B4J1P1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv30A0A0B4J1P1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv30A0A0B4J1P1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trbv30A0A0B4J1P1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv30A0A0B4J1P1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv30A0A0B4J1P1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv30A0A0B4J1P1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv30A0A0B4J1P1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv30A0A0B4J1P1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv30A0A0B4J1P1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.13□□□□□ -0.15
Trbv30A0A0B4J1P1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv30A0A0B4J1P1 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.13□□□□□ -0.15
Trbv30A0A0B4J1P1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms