Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Gm38205-201ENSMUST00000192243 258 ntBASIC16.69■□□□□ 0.26
Trav10A0A075B642 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav10A0A075B642 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trav10A0A075B642 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav10A0A075B642 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav10A0A075B642 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav10A0A075B642 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav10A0A075B642 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav10A0A075B642 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav10A0A075B642 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav10A0A075B642 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav10A0A075B642 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav10A0A075B642 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav10A0A075B642 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav10A0A075B642 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav10A0A075B642 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav10A0A075B642 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Trav10A0A075B642 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav10A0A075B642 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav10A0A075B642 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trav10A0A075B642 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav10A0A075B642 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav10A0A075B642 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav10A0A075B642 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav10A0A075B642 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.68■□□□□ 0.26
Trav10A0A075B642 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.68■□□□□ 0.26
Trav10A0A075B642 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav10A0A075B642 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav10A0A075B642 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav10A0A075B642 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Trav10A0A075B642 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav10A0A075B642 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trav10A0A075B642 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav10A0A075B642 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Trav10A0A075B642 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav10A0A075B642 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav10A0A075B642 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Trav10A0A075B642 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav10A0A075B642 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav10A0A075B642 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav10A0A075B642 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav10A0A075B642 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav10A0A075B642 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trav10A0A075B642 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav10A0A075B642 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav10A0A075B642 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav10A0A075B642 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.66■□□□□ 0.26
Trav10A0A075B642 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav10A0A075B642 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trav10A0A075B642 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trav10A0A075B642 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav10A0A075B642 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav10A0A075B642 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav10A0A075B642 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav10A0A075B642 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.66■□□□□ 0.26
Trav10A0A075B642 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav10A0A075B642 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav10A0A075B642 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav10A0A075B642 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trav10A0A075B642 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav10A0A075B642 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trav10A0A075B642 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav10A0A075B642 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav10A0A075B642 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav10A0A075B642 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav10A0A075B642 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav10A0A075B642 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav10A0A075B642 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.65■□□□□ 0.26
Trav10A0A075B642 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav10A0A075B642 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trav10A0A075B642 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trav10A0A075B642 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.65■□□□□ 0.26
Trav10A0A075B642 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav10A0A075B642 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.65■□□□□ 0.26
Trav10A0A075B642 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav10A0A075B642 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Trav10A0A075B642 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav10A0A075B642 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav10A0A075B642 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav10A0A075B642 Reep4-203ENSMUST00000226563 1444 ntBASIC16.64■□□□□ 0.25
Trav10A0A075B642 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.64■□□□□ 0.25
Trav10A0A075B642 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.64■□□□□ 0.25
Trav10A0A075B642 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav10A0A075B642 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.64■□□□□ 0.25
Trav10A0A075B642 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav10A0A075B642 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav10A0A075B642 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav10A0A075B642 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trav10A0A075B642 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav10A0A075B642 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav10A0A075B642 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav10A0A075B642 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
Trav10A0A075B642 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav10A0A075B642 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav10A0A075B642 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav10A0A075B642 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trav10A0A075B642 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trav10A0A075B642 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav10A0A075B642 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav10A0A075B642 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms