Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.62■□□□□ 0.41
Lhx6Q9R1R0 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.62■□□□□ 0.41
Lhx6Q9R1R0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.62■□□□□ 0.41
Lhx6Q9R1R0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Lhx6Q9R1R0 Gm7367-201ENSMUST00000057611 492 ntBASIC17.62■□□□□ 0.41
Lhx6Q9R1R0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx6Q9R1R0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx6Q9R1R0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx6Q9R1R0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx6Q9R1R0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx6Q9R1R0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx6Q9R1R0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx6Q9R1R0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx6Q9R1R0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx6Q9R1R0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx6Q9R1R0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.61■□□□□ 0.41
Lhx6Q9R1R0 Gm13323-201ENSMUST00000120245 1151 ntBASIC17.61■□□□□ 0.41
Lhx6Q9R1R0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx6Q9R1R0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.61■□□□□ 0.41
Lhx6Q9R1R0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx6Q9R1R0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx6Q9R1R0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Lhx6Q9R1R0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx6Q9R1R0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx6Q9R1R0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx6Q9R1R0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.6■□□□□ 0.41
Lhx6Q9R1R0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx6Q9R1R0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx6Q9R1R0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.6■□□□□ 0.41
Lhx6Q9R1R0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.6■□□□□ 0.41
Lhx6Q9R1R0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.6■□□□□ 0.41
Lhx6Q9R1R0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.6■□□□□ 0.41
Lhx6Q9R1R0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx6Q9R1R0 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Lhx6Q9R1R0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx6Q9R1R0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx6Q9R1R0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx6Q9R1R0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Lhx6Q9R1R0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Lhx6Q9R1R0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx6Q9R1R0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.59■□□□□ 0.41
Lhx6Q9R1R0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Lhx6Q9R1R0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Lhx6Q9R1R0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Lhx6Q9R1R0 Gm37055-201ENSMUST00000191866 133 ntBASIC17.59■□□□□ 0.41
Lhx6Q9R1R0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx6Q9R1R0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx6Q9R1R0 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx6Q9R1R0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx6Q9R1R0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Lhx6Q9R1R0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx6Q9R1R0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx6Q9R1R0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Lhx6Q9R1R0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx6Q9R1R0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx6Q9R1R0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.58■□□□□ 0.41
Lhx6Q9R1R0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lhx6Q9R1R0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lhx6Q9R1R0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lhx6Q9R1R0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lhx6Q9R1R0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.58■□□□□ 0.4
Lhx6Q9R1R0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lhx6Q9R1R0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lhx6Q9R1R0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lhx6Q9R1R0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lhx6Q9R1R0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.58■□□□□ 0.4
Lhx6Q9R1R0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.58■□□□□ 0.4
Lhx6Q9R1R0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx6Q9R1R0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx6Q9R1R0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Lhx6Q9R1R0 Gm27275-201ENSMUST00000184318 272 ntBASIC17.57■□□□□ 0.4
Lhx6Q9R1R0 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.57■□□□□ 0.4
Lhx6Q9R1R0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx6Q9R1R0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx6Q9R1R0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Lhx6Q9R1R0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx6Q9R1R0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx6Q9R1R0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx6Q9R1R0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx6Q9R1R0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx6Q9R1R0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lhx6Q9R1R0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lhx6Q9R1R0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.56■□□□□ 0.4
Lhx6Q9R1R0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Lhx6Q9R1R0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.56■□□□□ 0.4
Lhx6Q9R1R0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.56■□□□□ 0.4
Lhx6Q9R1R0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Lhx6Q9R1R0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lhx6Q9R1R0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lhx6Q9R1R0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lhx6Q9R1R0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Lhx6Q9R1R0 Gm5643-201ENSMUST00000117081 966 ntBASIC17.55■□□□□ 0.4
Lhx6Q9R1R0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Lhx6Q9R1R0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lhx6Q9R1R0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lhx6Q9R1R0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lhx6Q9R1R0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lhx6Q9R1R0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lhx6Q9R1R0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx6Q9R1R0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 133.1 ms