Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco4Q9JIS3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Smco4Q9JIS3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.25■□□□□ 0.03
Smco4Q9JIS3 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.25■□□□□ 0.03
Smco4Q9JIS3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Smco4Q9JIS3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco4Q9JIS3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Smco4Q9JIS3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smco4Q9JIS3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smco4Q9JIS3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco4Q9JIS3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smco4Q9JIS3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco4Q9JIS3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC15.25■□□□□ 0.03
Smco4Q9JIS3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco4Q9JIS3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco4Q9JIS3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco4Q9JIS3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco4Q9JIS3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Smco4Q9JIS3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco4Q9JIS3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Smco4Q9JIS3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smco4Q9JIS3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smco4Q9JIS3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Smco4Q9JIS3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smco4Q9JIS3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smco4Q9JIS3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smco4Q9JIS3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smco4Q9JIS3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smco4Q9JIS3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smco4Q9JIS3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Smco4Q9JIS3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smco4Q9JIS3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smco4Q9JIS3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smco4Q9JIS3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smco4Q9JIS3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smco4Q9JIS3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smco4Q9JIS3 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Smco4Q9JIS3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smco4Q9JIS3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smco4Q9JIS3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smco4Q9JIS3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smco4Q9JIS3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Smco4Q9JIS3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Smco4Q9JIS3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC15.23■□□□□ 0.03
Smco4Q9JIS3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.23■□□□□ 0.03
Smco4Q9JIS3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smco4Q9JIS3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smco4Q9JIS3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smco4Q9JIS3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smco4Q9JIS3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.23■□□□□ 0.03
Smco4Q9JIS3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smco4Q9JIS3 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.22■□□□□ 0.03
Smco4Q9JIS3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Smco4Q9JIS3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smco4Q9JIS3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Smco4Q9JIS3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smco4Q9JIS3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.22■□□□□ 0.03
Smco4Q9JIS3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smco4Q9JIS3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smco4Q9JIS3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.22■□□□□ 0.03
Smco4Q9JIS3 Gm6821-201ENSMUST00000107540 542 ntBASIC15.22■□□□□ 0.03
Smco4Q9JIS3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smco4Q9JIS3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC15.22■□□□□ 0.03
Smco4Q9JIS3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Smco4Q9JIS3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smco4Q9JIS3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smco4Q9JIS3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smco4Q9JIS3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Smco4Q9JIS3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smco4Q9JIS3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smco4Q9JIS3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smco4Q9JIS3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smco4Q9JIS3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smco4Q9JIS3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smco4Q9JIS3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.21■□□□□ 0.03
Smco4Q9JIS3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smco4Q9JIS3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smco4Q9JIS3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC15.21■□□□□ 0.03
Smco4Q9JIS3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Smco4Q9JIS3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smco4Q9JIS3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smco4Q9JIS3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Smco4Q9JIS3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smco4Q9JIS3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smco4Q9JIS3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smco4Q9JIS3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smco4Q9JIS3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smco4Q9JIS3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smco4Q9JIS3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smco4Q9JIS3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smco4Q9JIS3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smco4Q9JIS3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smco4Q9JIS3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smco4Q9JIS3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Smco4Q9JIS3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smco4Q9JIS3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Smco4Q9JIS3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Smco4Q9JIS3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smco4Q9JIS3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smco4Q9JIS3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms