Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Trim60Q8VI40 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim60Q8VI40 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.53■□□□□ 0.72
Trim60Q8VI40 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim60Q8VI40 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Trim60Q8VI40 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim60Q8VI40 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim60Q8VI40 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim60Q8VI40 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim60Q8VI40 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Trim60Q8VI40 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim60Q8VI40 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim60Q8VI40 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim60Q8VI40 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Trim60Q8VI40 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim60Q8VI40 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim60Q8VI40 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim60Q8VI40 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Trim60Q8VI40 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
Trim60Q8VI40 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
Trim60Q8VI40 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Trim60Q8VI40 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim60Q8VI40 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim60Q8VI40 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim60Q8VI40 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim60Q8VI40 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim60Q8VI40 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim60Q8VI40 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim60Q8VI40 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim60Q8VI40 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.51■□□□□ 0.71
Trim60Q8VI40 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Trim60Q8VI40 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim60Q8VI40 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Trim60Q8VI40 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim60Q8VI40 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim60Q8VI40 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Trim60Q8VI40 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.5■□□□□ 0.71
Trim60Q8VI40 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.5■□□□□ 0.71
Trim60Q8VI40 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.5■□□□□ 0.71
Trim60Q8VI40 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim60Q8VI40 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Trim60Q8VI40 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim60Q8VI40 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim60Q8VI40 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim60Q8VI40 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim60Q8VI40 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim60Q8VI40 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.49■□□□□ 0.71
Trim60Q8VI40 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trim60Q8VI40 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.49■□□□□ 0.71
Trim60Q8VI40 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trim60Q8VI40 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim60Q8VI40 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim60Q8VI40 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Trim60Q8VI40 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Trim60Q8VI40 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Trim60Q8VI40 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Trim60Q8VI40 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim60Q8VI40 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim60Q8VI40 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim60Q8VI40 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Trim60Q8VI40 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim60Q8VI40 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim60Q8VI40 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim60Q8VI40 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim60Q8VI40 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim60Q8VI40 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim60Q8VI40 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim60Q8VI40 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim60Q8VI40 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.47■□□□□ 0.71
Trim60Q8VI40 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.47■□□□□ 0.71
Trim60Q8VI40 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim60Q8VI40 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim60Q8VI40 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trim60Q8VI40 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim60Q8VI40 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim60Q8VI40 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.47■□□□□ 0.71
Trim60Q8VI40 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim60Q8VI40 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim60Q8VI40 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim60Q8VI40 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim60Q8VI40 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim60Q8VI40 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim60Q8VI40 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trim60Q8VI40 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim60Q8VI40 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim60Q8VI40 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trim60Q8VI40 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim60Q8VI40 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim60Q8VI40 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim60Q8VI40 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim60Q8VI40 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
Trim60Q8VI40 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim60Q8VI40 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim60Q8VI40 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.46■□□□□ 0.71
Trim60Q8VI40 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.7
Trim60Q8VI40 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim60Q8VI40 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Trim60Q8VI40 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim60Q8VI40 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trim60Q8VI40 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 313 ms