Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rpap2Q8VC34 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rpap2Q8VC34 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rpap2Q8VC34 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.77■□□□□ 0.92
Rpap2Q8VC34 BC021767-201ENSMUST00000126387 1716 ntBASIC20.77■□□□□ 0.92
Rpap2Q8VC34 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rpap2Q8VC34 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpap2Q8VC34 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rpap2Q8VC34 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpap2Q8VC34 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpap2Q8VC34 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.76■□□□□ 0.91
Rpap2Q8VC34 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpap2Q8VC34 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rpap2Q8VC34 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpap2Q8VC34 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpap2Q8VC34 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rpap2Q8VC34 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rpap2Q8VC34 Gm42642-201ENSMUST00000200683 355 ntBASIC20.75■□□□□ 0.91
Rpap2Q8VC34 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Rpap2Q8VC34 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rpap2Q8VC34 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.75■□□□□ 0.91
Rpap2Q8VC34 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpap2Q8VC34 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpap2Q8VC34 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rpap2Q8VC34 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpap2Q8VC34 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpap2Q8VC34 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpap2Q8VC34 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Rpap2Q8VC34 Gm13534-201ENSMUST00000121169 513 ntBASIC20.74■□□□□ 0.91
Rpap2Q8VC34 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rpap2Q8VC34 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpap2Q8VC34 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.74■□□□□ 0.91
Rpap2Q8VC34 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.74■□□□□ 0.91
Rpap2Q8VC34 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.74■□□□□ 0.91
Rpap2Q8VC34 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpap2Q8VC34 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpap2Q8VC34 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpap2Q8VC34 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rpap2Q8VC34 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Rpap2Q8VC34 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpap2Q8VC34 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpap2Q8VC34 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpap2Q8VC34 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpap2Q8VC34 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpap2Q8VC34 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpap2Q8VC34 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpap2Q8VC34 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.73■□□□□ 0.91
Rpap2Q8VC34 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpap2Q8VC34 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Rpap2Q8VC34 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.73■□□□□ 0.91
Rpap2Q8VC34 Gm10033-202ENSMUST00000211874 928 ntBASIC20.73■□□□□ 0.91
Rpap2Q8VC34 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rpap2Q8VC34 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.73■□□□□ 0.91
Rpap2Q8VC34 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpap2Q8VC34 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rpap2Q8VC34 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rpap2Q8VC34 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpap2Q8VC34 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpap2Q8VC34 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Rpap2Q8VC34 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Rpap2Q8VC34 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpap2Q8VC34 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpap2Q8VC34 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.72■□□□□ 0.91
Rpap2Q8VC34 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.72■□□□□ 0.91
Rpap2Q8VC34 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rpap2Q8VC34 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpap2Q8VC34 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpap2Q8VC34 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rpap2Q8VC34 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpap2Q8VC34 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpap2Q8VC34 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpap2Q8VC34 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rpap2Q8VC34 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rpap2Q8VC34 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.71■□□□□ 0.91
Rpap2Q8VC34 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Rpap2Q8VC34 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpap2Q8VC34 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpap2Q8VC34 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Rpap2Q8VC34 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpap2Q8VC34 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rpap2Q8VC34 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.71■□□□□ 0.91
Rpap2Q8VC34 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpap2Q8VC34 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rpap2Q8VC34 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.71■□□□□ 0.91
Rpap2Q8VC34 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpap2Q8VC34 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Rpap2Q8VC34 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpap2Q8VC34 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpap2Q8VC34 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rpap2Q8VC34 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rpap2Q8VC34 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpap2Q8VC34 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Rpap2Q8VC34 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpap2Q8VC34 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpap2Q8VC34 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpap2Q8VC34 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rpap2Q8VC34 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpap2Q8VC34 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpap2Q8VC34 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpap2Q8VC34 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms