Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ebf4Q8K4J2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ebf4Q8K4J2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ebf4Q8K4J2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ebf4Q8K4J2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ebf4Q8K4J2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ebf4Q8K4J2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ebf4Q8K4J2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ebf4Q8K4J2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ebf4Q8K4J2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ebf4Q8K4J2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ebf4Q8K4J2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ebf4Q8K4J2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ebf4Q8K4J2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ebf4Q8K4J2 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.23■□□□□ 0.35
Ebf4Q8K4J2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.22■□□□□ 0.35
Ebf4Q8K4J2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ebf4Q8K4J2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ebf4Q8K4J2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ebf4Q8K4J2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.22■□□□□ 0.35
Ebf4Q8K4J2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ebf4Q8K4J2 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.22■□□□□ 0.35
Ebf4Q8K4J2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Ebf4Q8K4J2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ebf4Q8K4J2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ebf4Q8K4J2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ebf4Q8K4J2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ebf4Q8K4J2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.22■□□□□ 0.35
Ebf4Q8K4J2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ebf4Q8K4J2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ebf4Q8K4J2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.22■□□□□ 0.35
Ebf4Q8K4J2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ebf4Q8K4J2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ebf4Q8K4J2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ebf4Q8K4J2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ebf4Q8K4J2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
Ebf4Q8K4J2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ebf4Q8K4J2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Ebf4Q8K4J2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.21■□□□□ 0.35
Ebf4Q8K4J2 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.21■□□□□ 0.35
Ebf4Q8K4J2 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.21■□□□□ 0.35
Ebf4Q8K4J2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Ebf4Q8K4J2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.21■□□□□ 0.35
Ebf4Q8K4J2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ebf4Q8K4J2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ebf4Q8K4J2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.2■□□□□ 0.34
Ebf4Q8K4J2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ebf4Q8K4J2 Gm45444-201ENSMUST00000211394 898 ntBASIC17.2■□□□□ 0.34
Ebf4Q8K4J2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ebf4Q8K4J2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ebf4Q8K4J2 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.2■□□□□ 0.34
Ebf4Q8K4J2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ebf4Q8K4J2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ebf4Q8K4J2 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.19■□□□□ 0.34
Ebf4Q8K4J2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ebf4Q8K4J2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.19■□□□□ 0.34
Ebf4Q8K4J2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ebf4Q8K4J2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ebf4Q8K4J2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ebf4Q8K4J2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ebf4Q8K4J2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ebf4Q8K4J2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ebf4Q8K4J2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ebf4Q8K4J2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ebf4Q8K4J2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ebf4Q8K4J2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ebf4Q8K4J2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ebf4Q8K4J2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ebf4Q8K4J2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ebf4Q8K4J2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Ebf4Q8K4J2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ebf4Q8K4J2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ebf4Q8K4J2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ebf4Q8K4J2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ebf4Q8K4J2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ebf4Q8K4J2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ebf4Q8K4J2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ebf4Q8K4J2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ebf4Q8K4J2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ebf4Q8K4J2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ebf4Q8K4J2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ebf4Q8K4J2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.17■□□□□ 0.34
Ebf4Q8K4J2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.17■□□□□ 0.34
Ebf4Q8K4J2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ebf4Q8K4J2 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.17■□□□□ 0.34
Ebf4Q8K4J2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ebf4Q8K4J2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ebf4Q8K4J2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ebf4Q8K4J2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ebf4Q8K4J2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Ebf4Q8K4J2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ebf4Q8K4J2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ebf4Q8K4J2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ebf4Q8K4J2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ebf4Q8K4J2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ebf4Q8K4J2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ebf4Q8K4J2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ebf4Q8K4J2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ebf4Q8K4J2 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.16■□□□□ 0.34
Ebf4Q8K4J2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms