Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp6nlQ80XC3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp6nlQ80XC3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.91■□□□□ 0.94
Usp6nlQ80XC3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Usp6nlQ80XC3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp6nlQ80XC3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp6nlQ80XC3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp6nlQ80XC3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Usp6nlQ80XC3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp6nlQ80XC3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp6nlQ80XC3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp6nlQ80XC3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.9■□□□□ 0.94
Usp6nlQ80XC3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp6nlQ80XC3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Usp6nlQ80XC3 Gm44549-201ENSMUST00000208351 577 ntBASIC20.9■□□□□ 0.94
Usp6nlQ80XC3 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.9■□□□□ 0.94
Usp6nlQ80XC3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp6nlQ80XC3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp6nlQ80XC3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp6nlQ80XC3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp6nlQ80XC3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp6nlQ80XC3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp6nlQ80XC3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp6nlQ80XC3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp6nlQ80XC3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp6nlQ80XC3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp6nlQ80XC3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Usp6nlQ80XC3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.89■□□□□ 0.93
Usp6nlQ80XC3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp6nlQ80XC3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp6nlQ80XC3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Usp6nlQ80XC3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Usp6nlQ80XC3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp6nlQ80XC3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp6nlQ80XC3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp6nlQ80XC3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp6nlQ80XC3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.88■□□□□ 0.93
Usp6nlQ80XC3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp6nlQ80XC3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.88■□□□□ 0.93
Usp6nlQ80XC3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp6nlQ80XC3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp6nlQ80XC3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp6nlQ80XC3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Usp6nlQ80XC3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.87■□□□□ 0.93
Usp6nlQ80XC3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp6nlQ80XC3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp6nlQ80XC3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Usp6nlQ80XC3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp6nlQ80XC3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Usp6nlQ80XC3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.87■□□□□ 0.93
Usp6nlQ80XC3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp6nlQ80XC3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp6nlQ80XC3 Gm11249-201ENSMUST00000117071 859 ntBASIC20.86■□□□□ 0.93
Usp6nlQ80XC3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.86■□□□□ 0.93
Usp6nlQ80XC3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp6nlQ80XC3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp6nlQ80XC3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usp6nlQ80XC3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp6nlQ80XC3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp6nlQ80XC3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp6nlQ80XC3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp6nlQ80XC3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Usp6nlQ80XC3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Usp6nlQ80XC3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Usp6nlQ80XC3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp6nlQ80XC3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.85■□□□□ 0.93
Usp6nlQ80XC3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.85■□□□□ 0.93
Usp6nlQ80XC3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp6nlQ80XC3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp6nlQ80XC3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usp6nlQ80XC3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp6nlQ80XC3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp6nlQ80XC3 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.85■□□□□ 0.93
Usp6nlQ80XC3 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.84■□□□□ 0.93
Usp6nlQ80XC3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp6nlQ80XC3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp6nlQ80XC3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp6nlQ80XC3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.84■□□□□ 0.93
Usp6nlQ80XC3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.84■□□□□ 0.93
Usp6nlQ80XC3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.84■□□□□ 0.93
Usp6nlQ80XC3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp6nlQ80XC3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp6nlQ80XC3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp6nlQ80XC3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp6nlQ80XC3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp6nlQ80XC3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp6nlQ80XC3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp6nlQ80XC3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp6nlQ80XC3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp6nlQ80XC3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
Usp6nlQ80XC3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp6nlQ80XC3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
Usp6nlQ80XC3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Usp6nlQ80XC3 Gm6576-201ENSMUST00000169678 883 ntBASIC20.83■□□□□ 0.93
Usp6nlQ80XC3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Usp6nlQ80XC3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp6nlQ80XC3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp6nlQ80XC3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp6nlQ80XC3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp6nlQ80XC3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms