Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shroom1Q5SX79 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Shroom1Q5SX79 Gm7860-201ENSMUST00000121190 879 ntBASIC20.1■□□□□ 0.81
Shroom1Q5SX79 Nespas-201ENSMUST00000143738 1083 ntBASIC20.1■□□□□ 0.81
Shroom1Q5SX79 Gm6211-202ENSMUST00000167849 925 ntBASIC20.1■□□□□ 0.81
Shroom1Q5SX79 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.1■□□□□ 0.81
Shroom1Q5SX79 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shroom1Q5SX79 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shroom1Q5SX79 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.1■□□□□ 0.81
Shroom1Q5SX79 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shroom1Q5SX79 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Shroom1Q5SX79 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Shroom1Q5SX79 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Shroom1Q5SX79 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
Shroom1Q5SX79 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shroom1Q5SX79 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.09■□□□□ 0.81
Shroom1Q5SX79 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shroom1Q5SX79 Gm10653-202ENSMUST00000139570 835 ntBASIC20.09■□□□□ 0.81
Shroom1Q5SX79 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.09■□□□□ 0.81
Shroom1Q5SX79 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shroom1Q5SX79 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shroom1Q5SX79 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shroom1Q5SX79 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shroom1Q5SX79 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Shroom1Q5SX79 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shroom1Q5SX79 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shroom1Q5SX79 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shroom1Q5SX79 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shroom1Q5SX79 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shroom1Q5SX79 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shroom1Q5SX79 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shroom1Q5SX79 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shroom1Q5SX79 Gm20760-201ENSMUST00000179197 648 ntBASIC20.08■□□□□ 0.81
Shroom1Q5SX79 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shroom1Q5SX79 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shroom1Q5SX79 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shroom1Q5SX79 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shroom1Q5SX79 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Shroom1Q5SX79 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Shroom1Q5SX79 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shroom1Q5SX79 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shroom1Q5SX79 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Shroom1Q5SX79 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Shroom1Q5SX79 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Shroom1Q5SX79 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.07■□□□□ 0.8
Shroom1Q5SX79 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shroom1Q5SX79 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shroom1Q5SX79 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shroom1Q5SX79 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.06■□□□□ 0.8
Shroom1Q5SX79 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Shroom1Q5SX79 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Shroom1Q5SX79 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Shroom1Q5SX79 Gm12527-201ENSMUST00000117967 564 ntBASIC20.06■□□□□ 0.8
Shroom1Q5SX79 Gm5408-201ENSMUST00000197998 747 ntBASIC20.06■□□□□ 0.8
Shroom1Q5SX79 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.06■□□□□ 0.8
Shroom1Q5SX79 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.06■□□□□ 0.8
Shroom1Q5SX79 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Shroom1Q5SX79 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shroom1Q5SX79 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shroom1Q5SX79 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shroom1Q5SX79 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shroom1Q5SX79 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Shroom1Q5SX79 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.05■□□□□ 0.8
Shroom1Q5SX79 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.05■□□□□ 0.8
Shroom1Q5SX79 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shroom1Q5SX79 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shroom1Q5SX79 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Shroom1Q5SX79 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Shroom1Q5SX79 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.04■□□□□ 0.8
Shroom1Q5SX79 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shroom1Q5SX79 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Shroom1Q5SX79 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Shroom1Q5SX79 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Shroom1Q5SX79 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Shroom1Q5SX79 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Shroom1Q5SX79 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shroom1Q5SX79 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shroom1Q5SX79 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shroom1Q5SX79 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shroom1Q5SX79 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Shroom1Q5SX79 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shroom1Q5SX79 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.03■□□□□ 0.8
Shroom1Q5SX79 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Shroom1Q5SX79 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Shroom1Q5SX79 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shroom1Q5SX79 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.03■□□□□ 0.8
Shroom1Q5SX79 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shroom1Q5SX79 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Shroom1Q5SX79 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Shroom1Q5SX79 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Shroom1Q5SX79 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.02■□□□□ 0.8
Shroom1Q5SX79 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Shroom1Q5SX79 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Shroom1Q5SX79 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Shroom1Q5SX79 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Shroom1Q5SX79 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Shroom1Q5SX79 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Shroom1Q5SX79 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Shroom1Q5SX79 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shroom1Q5SX79 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms