Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn6Q03958 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn6Q03958 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.93■□□□□ 0.62
Pfdn6Q03958 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Pfdn6Q03958 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn6Q03958 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn6Q03958 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn6Q03958 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Pfdn6Q03958 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
Pfdn6Q03958 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn6Q03958 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn6Q03958 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn6Q03958 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn6Q03958 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn6Q03958 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.92■□□□□ 0.62
Pfdn6Q03958 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Pfdn6Q03958 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn6Q03958 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.92■□□□□ 0.62
Pfdn6Q03958 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.92■□□□□ 0.62
Pfdn6Q03958 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn6Q03958 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn6Q03958 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn6Q03958 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn6Q03958 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Pfdn6Q03958 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn6Q03958 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn6Q03958 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Pfdn6Q03958 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pfdn6Q03958 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pfdn6Q03958 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Pfdn6Q03958 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pfdn6Q03958 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.91■□□□□ 0.62
Pfdn6Q03958 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Pfdn6Q03958 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pfdn6Q03958 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pfdn6Q03958 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Pfdn6Q03958 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Pfdn6Q03958 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.9■□□□□ 0.62
Pfdn6Q03958 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pfdn6Q03958 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Pfdn6Q03958 Gm40848-201ENSMUST00000221998 324 ntBASIC18.9■□□□□ 0.62
Pfdn6Q03958 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Pfdn6Q03958 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
Pfdn6Q03958 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.89■□□□□ 0.61
Pfdn6Q03958 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Pfdn6Q03958 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
Pfdn6Q03958 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Pfdn6Q03958 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.89■□□□□ 0.61
Pfdn6Q03958 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.89■□□□□ 0.61
Pfdn6Q03958 Gm43060-201ENSMUST00000200621 289 ntBASIC18.89■□□□□ 0.61
Pfdn6Q03958 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.89■□□□□ 0.61
Pfdn6Q03958 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pfdn6Q03958 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.89■□□□□ 0.61
Pfdn6Q03958 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pfdn6Q03958 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pfdn6Q03958 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pfdn6Q03958 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pfdn6Q03958 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pfdn6Q03958 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
Pfdn6Q03958 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pfdn6Q03958 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pfdn6Q03958 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pfdn6Q03958 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pfdn6Q03958 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pfdn6Q03958 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pfdn6Q03958 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pfdn6Q03958 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pfdn6Q03958 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.88■□□□□ 0.61
Pfdn6Q03958 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Pfdn6Q03958 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pfdn6Q03958 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.87■□□□□ 0.61
Pfdn6Q03958 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pfdn6Q03958 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.87■□□□□ 0.61
Pfdn6Q03958 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pfdn6Q03958 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pfdn6Q03958 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pfdn6Q03958 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Pfdn6Q03958 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pfdn6Q03958 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pfdn6Q03958 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pfdn6Q03958 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pfdn6Q03958 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pfdn6Q03958 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pfdn6Q03958 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pfdn6Q03958 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Pfdn6Q03958 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Pfdn6Q03958 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pfdn6Q03958 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pfdn6Q03958 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pfdn6Q03958 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.86■□□□□ 0.61
Pfdn6Q03958 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pfdn6Q03958 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pfdn6Q03958 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pfdn6Q03958 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.86■□□□□ 0.61
Pfdn6Q03958 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pfdn6Q03958 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pfdn6Q03958 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pfdn6Q03958 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pfdn6Q03958 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pfdn6Q03958 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms