Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Dkk1O54908 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Dkk1O54908 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Dkk1O54908 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dkk1O54908 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dkk1O54908 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dkk1O54908 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dkk1O54908 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
Dkk1O54908 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.39■□□□□ 0.21
Dkk1O54908 Gm28925-201ENSMUST00000188586 168 ntBASIC16.39■□□□□ 0.21
Dkk1O54908 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.39■□□□□ 0.21
Dkk1O54908 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.39■□□□□ 0.21
Dkk1O54908 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.39■□□□□ 0.21
Dkk1O54908 CT025561.1-201ENSMUST00000214972 674 ntBASIC16.39■□□□□ 0.21
Dkk1O54908 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Dkk1O54908 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dkk1O54908 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dkk1O54908 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dkk1O54908 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Dkk1O54908 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.39■□□□□ 0.21
Dkk1O54908 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Dkk1O54908 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Dkk1O54908 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.38■□□□□ 0.21
Dkk1O54908 Reep4-203ENSMUST00000226563 1444 ntBASIC16.38■□□□□ 0.21
Dkk1O54908 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Dkk1O54908 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.38■□□□□ 0.21
Dkk1O54908 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Dkk1O54908 Gm13146-201ENSMUST00000118508 780 ntBASIC16.38■□□□□ 0.21
Dkk1O54908 Gm38205-201ENSMUST00000192243 258 ntBASIC16.38■□□□□ 0.21
Dkk1O54908 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Dkk1O54908 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.38■□□□□ 0.21
Dkk1O54908 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dkk1O54908 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dkk1O54908 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Dkk1O54908 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.37■□□□□ 0.21
Dkk1O54908 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Dkk1O54908 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dkk1O54908 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dkk1O54908 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.37■□□□□ 0.21
Dkk1O54908 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.37■□□□□ 0.21
Dkk1O54908 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dkk1O54908 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dkk1O54908 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dkk1O54908 Gm45657-201ENSMUST00000211318 1349 ntBASIC16.37■□□□□ 0.21
Dkk1O54908 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dkk1O54908 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dkk1O54908 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Dkk1O54908 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.37■□□□□ 0.21
Dkk1O54908 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dkk1O54908 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Dkk1O54908 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Dkk1O54908 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Dkk1O54908 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Dkk1O54908 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Dkk1O54908 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Dkk1O54908 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Dkk1O54908 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Dkk1O54908 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Dkk1O54908 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Dkk1O54908 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.36■□□□□ 0.21
Dkk1O54908 Gm8495-201ENSMUST00000188740 694 ntBASIC16.36■□□□□ 0.21
Dkk1O54908 Gm42919-201ENSMUST00000197753 1284 ntBASIC16.36■□□□□ 0.21
Dkk1O54908 AC102542.1-201ENSMUST00000225204 1138 ntBASIC16.36■□□□□ 0.21
Dkk1O54908 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Dkk1O54908 Gm5874-201ENSMUST00000096101 508 ntBASIC16.36■□□□□ 0.21
Dkk1O54908 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Dkk1O54908 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Dkk1O54908 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Dkk1O54908 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.35■□□□□ 0.21
Dkk1O54908 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Dkk1O54908 Gm13234-201ENSMUST00000120010 747 ntBASIC16.35■□□□□ 0.21
Dkk1O54908 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Dkk1O54908 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Dkk1O54908 Gm10033-202ENSMUST00000211874 928 ntBASIC16.35■□□□□ 0.21
Dkk1O54908 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Dkk1O54908 Gm9988-201ENSMUST00000069786 435 ntBASIC16.35■□□□□ 0.21
Dkk1O54908 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.35■□□□□ 0.21
Dkk1O54908 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Dkk1O54908 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Dkk1O54908 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Dkk1O54908 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Dkk1O54908 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Dkk1O54908 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Dkk1O54908 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Dkk1O54908 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Dkk1O54908 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Dkk1O54908 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Dkk1O54908 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Dkk1O54908 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Dkk1O54908 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Dkk1O54908 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Dkk1O54908 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Dkk1O54908 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Dkk1O54908 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.34■□□□□ 0.21
Dkk1O54908 Gm45166-201ENSMUST00000209073 683 ntBASIC16.34■□□□□ 0.21
Dkk1O54908 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Dkk1O54908 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Dkk1O54908 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.34■□□□□ 0.21
Dkk1O54908 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Dkk1O54908 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms