Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
4933424G06RikA0A140LIP3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
4933424G06RikA0A140LIP3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
4933424G06RikA0A140LIP3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
4933424G06RikA0A140LIP3 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.31■□□□□ 0.68
4933424G06RikA0A140LIP3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
4933424G06RikA0A140LIP3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
4933424G06RikA0A140LIP3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
4933424G06RikA0A140LIP3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
4933424G06RikA0A140LIP3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
4933424G06RikA0A140LIP3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
4933424G06RikA0A140LIP3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
4933424G06RikA0A140LIP3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.3■□□□□ 0.68
4933424G06RikA0A140LIP3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
4933424G06RikA0A140LIP3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.3■□□□□ 0.68
4933424G06RikA0A140LIP3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
4933424G06RikA0A140LIP3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
4933424G06RikA0A140LIP3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
4933424G06RikA0A140LIP3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
4933424G06RikA0A140LIP3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
4933424G06RikA0A140LIP3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
4933424G06RikA0A140LIP3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
4933424G06RikA0A140LIP3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
4933424G06RikA0A140LIP3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
4933424G06RikA0A140LIP3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.29■□□□□ 0.68
4933424G06RikA0A140LIP3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
4933424G06RikA0A140LIP3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
4933424G06RikA0A140LIP3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.29■□□□□ 0.68
4933424G06RikA0A140LIP3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
4933424G06RikA0A140LIP3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
4933424G06RikA0A140LIP3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
4933424G06RikA0A140LIP3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
4933424G06RikA0A140LIP3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
4933424G06RikA0A140LIP3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
4933424G06RikA0A140LIP3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
4933424G06RikA0A140LIP3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
4933424G06RikA0A140LIP3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
4933424G06RikA0A140LIP3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
4933424G06RikA0A140LIP3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
4933424G06RikA0A140LIP3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
4933424G06RikA0A140LIP3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
4933424G06RikA0A140LIP3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
4933424G06RikA0A140LIP3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
4933424G06RikA0A140LIP3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
4933424G06RikA0A140LIP3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
4933424G06RikA0A140LIP3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
4933424G06RikA0A140LIP3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
4933424G06RikA0A140LIP3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
4933424G06RikA0A140LIP3 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.27■□□□□ 0.68
4933424G06RikA0A140LIP3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
4933424G06RikA0A140LIP3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.27■□□□□ 0.68
4933424G06RikA0A140LIP3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
4933424G06RikA0A140LIP3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
4933424G06RikA0A140LIP3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.27■□□□□ 0.68
4933424G06RikA0A140LIP3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
4933424G06RikA0A140LIP3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
4933424G06RikA0A140LIP3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
4933424G06RikA0A140LIP3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.27■□□□□ 0.68
4933424G06RikA0A140LIP3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
4933424G06RikA0A140LIP3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
4933424G06RikA0A140LIP3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
4933424G06RikA0A140LIP3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
4933424G06RikA0A140LIP3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
4933424G06RikA0A140LIP3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
4933424G06RikA0A140LIP3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.26■□□□□ 0.67
4933424G06RikA0A140LIP3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
4933424G06RikA0A140LIP3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
4933424G06RikA0A140LIP3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.26■□□□□ 0.67
4933424G06RikA0A140LIP3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
4933424G06RikA0A140LIP3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
4933424G06RikA0A140LIP3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
4933424G06RikA0A140LIP3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
4933424G06RikA0A140LIP3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
4933424G06RikA0A140LIP3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
4933424G06RikA0A140LIP3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
4933424G06RikA0A140LIP3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.25■□□□□ 0.67
4933424G06RikA0A140LIP3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
4933424G06RikA0A140LIP3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
4933424G06RikA0A140LIP3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
4933424G06RikA0A140LIP3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
4933424G06RikA0A140LIP3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.25■□□□□ 0.67
4933424G06RikA0A140LIP3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.25■□□□□ 0.67
4933424G06RikA0A140LIP3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
4933424G06RikA0A140LIP3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
4933424G06RikA0A140LIP3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
4933424G06RikA0A140LIP3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
4933424G06RikA0A140LIP3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
4933424G06RikA0A140LIP3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
4933424G06RikA0A140LIP3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
4933424G06RikA0A140LIP3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
4933424G06RikA0A140LIP3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
4933424G06RikA0A140LIP3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
4933424G06RikA0A140LIP3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
4933424G06RikA0A140LIP3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
4933424G06RikA0A140LIP3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
4933424G06RikA0A140LIP3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
4933424G06RikA0A140LIP3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
4933424G06RikA0A140LIP3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
4933424G06RikA0A140LIP3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
4933424G06RikA0A140LIP3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms