Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav17A0A075B655 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav17A0A075B655 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav17A0A075B655 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav17A0A075B655 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav17A0A075B655 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav17A0A075B655 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav17A0A075B655 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Trav17A0A075B655 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav17A0A075B655 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav17A0A075B655 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav17A0A075B655 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav17A0A075B655 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Trav17A0A075B655 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Trav17A0A075B655 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav17A0A075B655 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav17A0A075B655 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.01□□□□□ -0.01
Trav17A0A075B655 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trav17A0A075B655 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav17A0A075B655 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav17A0A075B655 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav17A0A075B655 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav17A0A075B655 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav17A0A075B655 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav17A0A075B655 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav17A0A075B655 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav17A0A075B655 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.01□□□□□ -0.01
Trav17A0A075B655 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav17A0A075B655 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav17A0A075B655 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav17A0A075B655 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav17A0A075B655 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav17A0A075B655 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav17A0A075B655 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav17A0A075B655 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Trav17A0A075B655 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav17A0A075B655 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav17A0A075B655 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav17A0A075B655 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav17A0A075B655 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav17A0A075B655 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav17A0A075B655 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav17A0A075B655 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav17A0A075B655 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav17A0A075B655 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Trav17A0A075B655 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav17A0A075B655 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Trav17A0A075B655 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav17A0A075B655 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav17A0A075B655 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav17A0A075B655 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav17A0A075B655 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav17A0A075B655 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav17A0A075B655 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav17A0A075B655 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav17A0A075B655 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav17A0A075B655 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav17A0A075B655 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav17A0A075B655 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav17A0A075B655 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav17A0A075B655 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trav17A0A075B655 Grk6-206ENSMUST00000224995 2971 ntBASIC14.98□□□□□ -0.01
Trav17A0A075B655 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav17A0A075B655 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav17A0A075B655 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav17A0A075B655 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav17A0A075B655 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav17A0A075B655 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav17A0A075B655 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav17A0A075B655 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Trav17A0A075B655 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav17A0A075B655 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trav17A0A075B655 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav17A0A075B655 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav17A0A075B655 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav17A0A075B655 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav17A0A075B655 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav17A0A075B655 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav17A0A075B655 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav17A0A075B655 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav17A0A075B655 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav17A0A075B655 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav17A0A075B655 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav17A0A075B655 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav17A0A075B655 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.97□□□□□ -0.01
Trav17A0A075B655 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav17A0A075B655 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav17A0A075B655 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav17A0A075B655 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav17A0A075B655 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav17A0A075B655 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav17A0A075B655 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav17A0A075B655 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav17A0A075B655 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav17A0A075B655 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav17A0A075B655 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav17A0A075B655 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav17A0A075B655 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.96□□□□□ -0.01
Trav17A0A075B655 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav17A0A075B655 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms