Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb1S4R1E0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
H2afb1S4R1E0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb1S4R1E0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb1S4R1E0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
H2afb1S4R1E0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb1S4R1E0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb1S4R1E0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.13■□□□□ 0.33
H2afb1S4R1E0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb1S4R1E0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb1S4R1E0 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.13■□□□□ 0.33
H2afb1S4R1E0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb1S4R1E0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb1S4R1E0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb1S4R1E0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.13■□□□□ 0.33
H2afb1S4R1E0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
H2afb1S4R1E0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb1S4R1E0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb1S4R1E0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
H2afb1S4R1E0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb1S4R1E0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb1S4R1E0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb1S4R1E0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
H2afb1S4R1E0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb1S4R1E0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb1S4R1E0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
H2afb1S4R1E0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb1S4R1E0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
H2afb1S4R1E0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb1S4R1E0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
H2afb1S4R1E0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb1S4R1E0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
H2afb1S4R1E0 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.12■□□□□ 0.33
H2afb1S4R1E0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb1S4R1E0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb1S4R1E0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
H2afb1S4R1E0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb1S4R1E0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.12■□□□□ 0.33
H2afb1S4R1E0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb1S4R1E0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb1S4R1E0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.12■□□□□ 0.33
H2afb1S4R1E0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb1S4R1E0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
H2afb1S4R1E0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
H2afb1S4R1E0 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.12■□□□□ 0.33
H2afb1S4R1E0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb1S4R1E0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
H2afb1S4R1E0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb1S4R1E0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb1S4R1E0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb1S4R1E0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb1S4R1E0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb1S4R1E0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb1S4R1E0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.11■□□□□ 0.33
H2afb1S4R1E0 Gm9847-201ENSMUST00000052528 599 ntBASIC17.11■□□□□ 0.33
H2afb1S4R1E0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb1S4R1E0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
H2afb1S4R1E0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb1S4R1E0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb1S4R1E0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb1S4R1E0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb1S4R1E0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb1S4R1E0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb1S4R1E0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb1S4R1E0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb1S4R1E0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb1S4R1E0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb1S4R1E0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb1S4R1E0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb1S4R1E0 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.1■□□□□ 0.33
H2afb1S4R1E0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
H2afb1S4R1E0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
H2afb1S4R1E0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb1S4R1E0 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.09■□□□□ 0.33
H2afb1S4R1E0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb1S4R1E0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb1S4R1E0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb1S4R1E0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
H2afb1S4R1E0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb1S4R1E0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.09■□□□□ 0.33
H2afb1S4R1E0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb1S4R1E0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb1S4R1E0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb1S4R1E0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
H2afb1S4R1E0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
H2afb1S4R1E0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb1S4R1E0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb1S4R1E0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
H2afb1S4R1E0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
H2afb1S4R1E0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
H2afb1S4R1E0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.08■□□□□ 0.33
H2afb1S4R1E0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
H2afb1S4R1E0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
H2afb1S4R1E0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
H2afb1S4R1E0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
H2afb1S4R1E0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2afb1S4R1E0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.08■□□□□ 0.32
H2afb1S4R1E0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2afb1S4R1E0 Serp2-204ENSMUST00000228055 705 ntBASIC17.08■□□□□ 0.32
H2afb1S4R1E0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms