Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Mbd3l1Q9D9H3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.45■□□□□ 0.22
Mbd3l1Q9D9H3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mbd3l1Q9D9H3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mbd3l1Q9D9H3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Mbd3l1Q9D9H3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Mbd3l1Q9D9H3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mbd3l1Q9D9H3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Mbd3l1Q9D9H3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mbd3l1Q9D9H3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Mbd3l1Q9D9H3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mbd3l1Q9D9H3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mbd3l1Q9D9H3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mbd3l1Q9D9H3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.44■□□□□ 0.22
Mbd3l1Q9D9H3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.44■□□□□ 0.22
Mbd3l1Q9D9H3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mbd3l1Q9D9H3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Mbd3l1Q9D9H3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.44■□□□□ 0.22
Mbd3l1Q9D9H3 Gm42809-201ENSMUST00000198429 1138 ntBASIC16.44■□□□□ 0.22
Mbd3l1Q9D9H3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.44■□□□□ 0.22
Mbd3l1Q9D9H3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.44■□□□□ 0.22
Mbd3l1Q9D9H3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mbd3l1Q9D9H3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mbd3l1Q9D9H3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Mbd3l1Q9D9H3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mbd3l1Q9D9H3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mbd3l1Q9D9H3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mbd3l1Q9D9H3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mbd3l1Q9D9H3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mbd3l1Q9D9H3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mbd3l1Q9D9H3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mbd3l1Q9D9H3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mbd3l1Q9D9H3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mbd3l1Q9D9H3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mbd3l1Q9D9H3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mbd3l1Q9D9H3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mbd3l1Q9D9H3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mbd3l1Q9D9H3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC16.43■□□□□ 0.22
Mbd3l1Q9D9H3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mbd3l1Q9D9H3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Mbd3l1Q9D9H3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mbd3l1Q9D9H3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mbd3l1Q9D9H3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Mbd3l1Q9D9H3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mbd3l1Q9D9H3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mbd3l1Q9D9H3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mbd3l1Q9D9H3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mbd3l1Q9D9H3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mbd3l1Q9D9H3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Mbd3l1Q9D9H3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mbd3l1Q9D9H3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mbd3l1Q9D9H3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mbd3l1Q9D9H3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mbd3l1Q9D9H3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mbd3l1Q9D9H3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Mbd3l1Q9D9H3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Mbd3l1Q9D9H3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mbd3l1Q9D9H3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Mbd3l1Q9D9H3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mbd3l1Q9D9H3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mbd3l1Q9D9H3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mbd3l1Q9D9H3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Mbd3l1Q9D9H3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.41■□□□□ 0.22
Mbd3l1Q9D9H3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mbd3l1Q9D9H3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mbd3l1Q9D9H3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mbd3l1Q9D9H3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mbd3l1Q9D9H3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mbd3l1Q9D9H3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mbd3l1Q9D9H3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mbd3l1Q9D9H3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.41■□□□□ 0.22
Mbd3l1Q9D9H3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mbd3l1Q9D9H3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Mbd3l1Q9D9H3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mbd3l1Q9D9H3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mbd3l1Q9D9H3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Mbd3l1Q9D9H3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mbd3l1Q9D9H3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mbd3l1Q9D9H3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mbd3l1Q9D9H3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Mbd3l1Q9D9H3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mbd3l1Q9D9H3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mbd3l1Q9D9H3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mbd3l1Q9D9H3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mbd3l1Q9D9H3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Mbd3l1Q9D9H3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16.4■□□□□ 0.22
Mbd3l1Q9D9H3 Tdp2-203ENSMUST00000223804 1136 ntBASIC16.4■□□□□ 0.22
Mbd3l1Q9D9H3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Mbd3l1Q9D9H3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mbd3l1Q9D9H3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Mbd3l1Q9D9H3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mbd3l1Q9D9H3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Mbd3l1Q9D9H3 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.4■□□□□ 0.22
Mbd3l1Q9D9H3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mbd3l1Q9D9H3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mbd3l1Q9D9H3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mbd3l1Q9D9H3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mbd3l1Q9D9H3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mbd3l1Q9D9H3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Mbd3l1Q9D9H3 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.39■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms