Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smchd1Q6P5D8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smchd1Q6P5D8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smchd1Q6P5D8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smchd1Q6P5D8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
Smchd1Q6P5D8 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.01■□□□□ 0.95
Smchd1Q6P5D8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smchd1Q6P5D8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smchd1Q6P5D8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smchd1Q6P5D8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smchd1Q6P5D8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21■□□□□ 0.95
Smchd1Q6P5D8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smchd1Q6P5D8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smchd1Q6P5D8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Smchd1Q6P5D8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smchd1Q6P5D8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smchd1Q6P5D8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smchd1Q6P5D8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.99■□□□□ 0.95
Smchd1Q6P5D8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smchd1Q6P5D8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smchd1Q6P5D8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.99■□□□□ 0.95
Smchd1Q6P5D8 Gm5408-201ENSMUST00000197998 747 ntBASIC20.99■□□□□ 0.95
Smchd1Q6P5D8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Smchd1Q6P5D8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smchd1Q6P5D8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smchd1Q6P5D8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smchd1Q6P5D8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.99■□□□□ 0.95
Smchd1Q6P5D8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smchd1Q6P5D8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
Smchd1Q6P5D8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smchd1Q6P5D8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Smchd1Q6P5D8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.98■□□□□ 0.95
Smchd1Q6P5D8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smchd1Q6P5D8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Smchd1Q6P5D8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smchd1Q6P5D8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smchd1Q6P5D8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smchd1Q6P5D8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smchd1Q6P5D8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Smchd1Q6P5D8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smchd1Q6P5D8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smchd1Q6P5D8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smchd1Q6P5D8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smchd1Q6P5D8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smchd1Q6P5D8 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.97■□□□□ 0.95
Smchd1Q6P5D8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Smchd1Q6P5D8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.97■□□□□ 0.95
Smchd1Q6P5D8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Smchd1Q6P5D8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smchd1Q6P5D8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Smchd1Q6P5D8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.97■□□□□ 0.95
Smchd1Q6P5D8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smchd1Q6P5D8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smchd1Q6P5D8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smchd1Q6P5D8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smchd1Q6P5D8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Smchd1Q6P5D8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smchd1Q6P5D8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Smchd1Q6P5D8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Smchd1Q6P5D8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Smchd1Q6P5D8 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.95■□□□□ 0.94
Smchd1Q6P5D8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smchd1Q6P5D8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smchd1Q6P5D8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smchd1Q6P5D8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smchd1Q6P5D8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smchd1Q6P5D8 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.95■□□□□ 0.94
Smchd1Q6P5D8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smchd1Q6P5D8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smchd1Q6P5D8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smchd1Q6P5D8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.94■□□□□ 0.94
Smchd1Q6P5D8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smchd1Q6P5D8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Smchd1Q6P5D8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smchd1Q6P5D8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smchd1Q6P5D8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smchd1Q6P5D8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smchd1Q6P5D8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smchd1Q6P5D8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smchd1Q6P5D8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smchd1Q6P5D8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.93■□□□□ 0.94
Smchd1Q6P5D8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smchd1Q6P5D8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smchd1Q6P5D8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smchd1Q6P5D8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smchd1Q6P5D8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smchd1Q6P5D8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Smchd1Q6P5D8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.92■□□□□ 0.94
Smchd1Q6P5D8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smchd1Q6P5D8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smchd1Q6P5D8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smchd1Q6P5D8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Smchd1Q6P5D8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smchd1Q6P5D8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smchd1Q6P5D8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smchd1Q6P5D8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.91■□□□□ 0.94
Smchd1Q6P5D8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smchd1Q6P5D8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smchd1Q6P5D8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.91■□□□□ 0.94
Smchd1Q6P5D8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms