Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.04■□□□□ 0.48
VcanQ62059 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VcanQ62059 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.04■□□□□ 0.48
VcanQ62059 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
VcanQ62059 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VcanQ62059 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VcanQ62059 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.04■□□□□ 0.48
VcanQ62059 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VcanQ62059 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VcanQ62059 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VcanQ62059 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VcanQ62059 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VcanQ62059 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VcanQ62059 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VcanQ62059 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.04■□□□□ 0.48
VcanQ62059 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VcanQ62059 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VcanQ62059 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VcanQ62059 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VcanQ62059 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VcanQ62059 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VcanQ62059 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
VcanQ62059 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
VcanQ62059 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
VcanQ62059 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VcanQ62059 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.02■□□□□ 0.48
VcanQ62059 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VcanQ62059 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VcanQ62059 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
VcanQ62059 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VcanQ62059 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VcanQ62059 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.02■□□□□ 0.48
VcanQ62059 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VcanQ62059 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VcanQ62059 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VcanQ62059 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
VcanQ62059 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
VcanQ62059 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VcanQ62059 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
VcanQ62059 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VcanQ62059 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VcanQ62059 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
VcanQ62059 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
VcanQ62059 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
VcanQ62059 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VcanQ62059 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VcanQ62059 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.01■□□□□ 0.47
VcanQ62059 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VcanQ62059 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VcanQ62059 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VcanQ62059 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
VcanQ62059 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
VcanQ62059 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VcanQ62059 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18■□□□□ 0.47
VcanQ62059 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VcanQ62059 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18■□□□□ 0.47
VcanQ62059 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
VcanQ62059 Gm7889-201ENSMUST00000185591 958 ntBASIC18■□□□□ 0.47
VcanQ62059 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VcanQ62059 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VcanQ62059 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18■□□□□ 0.47
VcanQ62059 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
VcanQ62059 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18■□□□□ 0.47
VcanQ62059 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18■□□□□ 0.47
VcanQ62059 AC159205.3-201ENSMUST00000224614 874 ntBASIC18■□□□□ 0.47
VcanQ62059 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VcanQ62059 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VcanQ62059 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VcanQ62059 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.99■□□□□ 0.47
VcanQ62059 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VcanQ62059 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VcanQ62059 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VcanQ62059 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.99■□□□□ 0.47
VcanQ62059 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.99■□□□□ 0.47
VcanQ62059 Gm11539-201ENSMUST00000119837 557 ntBASIC17.99■□□□□ 0.47
VcanQ62059 Gm13436-201ENSMUST00000120418 567 ntBASIC17.99■□□□□ 0.47
VcanQ62059 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.99■□□□□ 0.47
VcanQ62059 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
VcanQ62059 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VcanQ62059 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
VcanQ62059 Mir6236-201ENSMUST00000184437 123 ntBASIC17.99■□□□□ 0.47
VcanQ62059 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
VcanQ62059 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
VcanQ62059 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
VcanQ62059 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VcanQ62059 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VcanQ62059 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
VcanQ62059 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VcanQ62059 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VcanQ62059 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
VcanQ62059 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VcanQ62059 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
VcanQ62059 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
VcanQ62059 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
VcanQ62059 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VcanQ62059 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VcanQ62059 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VcanQ62059 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.97■□□□□ 0.47
VcanQ62059 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.97■□□□□ 0.47
VcanQ62059 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms