Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col10a1Q05306 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col10a1Q05306 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col10a1Q05306 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col10a1Q05306 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col10a1Q05306 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col10a1Q05306 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col10a1Q05306 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col10a1Q05306 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col10a1Q05306 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col10a1Q05306 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col10a1Q05306 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Col10a1Q05306 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Col10a1Q05306 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col10a1Q05306 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Col10a1Q05306 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col10a1Q05306 Gm13234-201ENSMUST00000120010 747 ntBASIC17.45■□□□□ 0.38
Col10a1Q05306 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col10a1Q05306 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.45■□□□□ 0.38
Col10a1Q05306 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col10a1Q05306 Gm8495-201ENSMUST00000188740 694 ntBASIC17.45■□□□□ 0.38
Col10a1Q05306 Gm42642-201ENSMUST00000200683 355 ntBASIC17.45■□□□□ 0.38
Col10a1Q05306 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col10a1Q05306 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col10a1Q05306 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.45■□□□□ 0.38
Col10a1Q05306 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col10a1Q05306 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Col10a1Q05306 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.45■□□□□ 0.38
Col10a1Q05306 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
Col10a1Q05306 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Col10a1Q05306 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Col10a1Q05306 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col10a1Q05306 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col10a1Q05306 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col10a1Q05306 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Col10a1Q05306 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.44■□□□□ 0.38
Col10a1Q05306 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.44■□□□□ 0.38
Col10a1Q05306 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col10a1Q05306 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.44■□□□□ 0.38
Col10a1Q05306 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col10a1Q05306 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col10a1Q05306 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col10a1Q05306 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col10a1Q05306 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Col10a1Q05306 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col10a1Q05306 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col10a1Q05306 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col10a1Q05306 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col10a1Q05306 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col10a1Q05306 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.42■□□□□ 0.38
Col10a1Q05306 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col10a1Q05306 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col10a1Q05306 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Col10a1Q05306 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col10a1Q05306 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col10a1Q05306 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col10a1Q05306 Gm18671-201ENSMUST00000214826 683 ntBASIC17.41■□□□□ 0.38
Col10a1Q05306 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col10a1Q05306 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col10a1Q05306 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col10a1Q05306 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col10a1Q05306 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col10a1Q05306 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col10a1Q05306 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.4■□□□□ 0.38
Col10a1Q05306 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col10a1Q05306 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col10a1Q05306 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Col10a1Q05306 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col10a1Q05306 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col10a1Q05306 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col10a1Q05306 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.4■□□□□ 0.38
Col10a1Q05306 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col10a1Q05306 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.4■□□□□ 0.38
Col10a1Q05306 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.4■□□□□ 0.38
Col10a1Q05306 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.4■□□□□ 0.38
Col10a1Q05306 Gm10033-202ENSMUST00000211874 928 ntBASIC17.4■□□□□ 0.38
Col10a1Q05306 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.4■□□□□ 0.38
Col10a1Q05306 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.4■□□□□ 0.38
Col10a1Q05306 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col10a1Q05306 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col10a1Q05306 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col10a1Q05306 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Col10a1Q05306 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Col10a1Q05306 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col10a1Q05306 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col10a1Q05306 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.39■□□□□ 0.37
Col10a1Q05306 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col10a1Q05306 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col10a1Q05306 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col10a1Q05306 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col10a1Q05306 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col10a1Q05306 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col10a1Q05306 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col10a1Q05306 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col10a1Q05306 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.39■□□□□ 0.37
Col10a1Q05306 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col10a1Q05306 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col10a1Q05306 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Col10a1Q05306 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col10a1Q05306 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms