Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Thumpd3P97770 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Thumpd3P97770 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Thumpd3P97770 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Thumpd3P97770 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Thumpd3P97770 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
Thumpd3P97770 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Thumpd3P97770 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Thumpd3P97770 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Thumpd3P97770 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Thumpd3P97770 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Thumpd3P97770 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Thumpd3P97770 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Thumpd3P97770 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Thumpd3P97770 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Thumpd3P97770 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.21■□□□□ 0.67
Thumpd3P97770 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.21■□□□□ 0.67
Thumpd3P97770 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Thumpd3P97770 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.21■□□□□ 0.67
Thumpd3P97770 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.21■□□□□ 0.67
Thumpd3P97770 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.21■□□□□ 0.67
Thumpd3P97770 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.21■□□□□ 0.67
Thumpd3P97770 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Thumpd3P97770 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Thumpd3P97770 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Thumpd3P97770 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Thumpd3P97770 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Thumpd3P97770 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Thumpd3P97770 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Thumpd3P97770 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Thumpd3P97770 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Thumpd3P97770 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Thumpd3P97770 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Thumpd3P97770 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Thumpd3P97770 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Thumpd3P97770 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Thumpd3P97770 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Thumpd3P97770 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Thumpd3P97770 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Thumpd3P97770 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.2■□□□□ 0.66
Thumpd3P97770 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.2■□□□□ 0.66
Thumpd3P97770 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Thumpd3P97770 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.2■□□□□ 0.66
Thumpd3P97770 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Thumpd3P97770 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Thumpd3P97770 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Thumpd3P97770 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.2■□□□□ 0.66
Thumpd3P97770 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Thumpd3P97770 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Thumpd3P97770 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Thumpd3P97770 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.19■□□□□ 0.66
Thumpd3P97770 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Thumpd3P97770 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Thumpd3P97770 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Thumpd3P97770 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Thumpd3P97770 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Thumpd3P97770 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Thumpd3P97770 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Thumpd3P97770 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Thumpd3P97770 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Thumpd3P97770 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.19■□□□□ 0.66
Thumpd3P97770 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Thumpd3P97770 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Thumpd3P97770 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Thumpd3P97770 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Thumpd3P97770 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Thumpd3P97770 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Thumpd3P97770 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Thumpd3P97770 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Thumpd3P97770 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Thumpd3P97770 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.19■□□□□ 0.66
Thumpd3P97770 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Thumpd3P97770 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.18■□□□□ 0.66
Thumpd3P97770 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Thumpd3P97770 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Thumpd3P97770 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Thumpd3P97770 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Thumpd3P97770 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.18■□□□□ 0.66
Thumpd3P97770 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Thumpd3P97770 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Thumpd3P97770 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Thumpd3P97770 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Thumpd3P97770 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Thumpd3P97770 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Thumpd3P97770 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Thumpd3P97770 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Thumpd3P97770 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Thumpd3P97770 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Thumpd3P97770 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Thumpd3P97770 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Thumpd3P97770 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Thumpd3P97770 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Thumpd3P97770 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Thumpd3P97770 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Thumpd3P97770 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Thumpd3P97770 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Thumpd3P97770 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Thumpd3P97770 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Thumpd3P97770 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Thumpd3P97770 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms