Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Hoxd8P23463 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxd8P23463 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxd8P23463 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxd8P23463 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxd8P23463 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxd8P23463 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.75■□□□□ 0.75
Hoxd8P23463 Gm27275-201ENSMUST00000184318 272 ntBASIC19.75■□□□□ 0.75
Hoxd8P23463 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Hoxd8P23463 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxd8P23463 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxd8P23463 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Hoxd8P23463 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxd8P23463 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxd8P23463 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxd8P23463 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.75■□□□□ 0.75
Hoxd8P23463 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxd8P23463 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxd8P23463 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.74■□□□□ 0.75
Hoxd8P23463 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxd8P23463 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxd8P23463 Gm2559-201ENSMUST00000201323 363 ntBASIC19.74■□□□□ 0.75
Hoxd8P23463 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.74■□□□□ 0.75
Hoxd8P23463 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Hoxd8P23463 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxd8P23463 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxd8P23463 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxd8P23463 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxd8P23463 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxd8P23463 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxd8P23463 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Hoxd8P23463 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxd8P23463 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxd8P23463 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxd8P23463 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxd8P23463 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.73■□□□□ 0.75
Hoxd8P23463 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.73■□□□□ 0.75
Hoxd8P23463 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Hoxd8P23463 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxd8P23463 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Hoxd8P23463 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxd8P23463 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxd8P23463 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxd8P23463 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxd8P23463 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.72■□□□□ 0.75
Hoxd8P23463 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.72■□□□□ 0.75
Hoxd8P23463 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Hoxd8P23463 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.72■□□□□ 0.75
Hoxd8P23463 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxd8P23463 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxd8P23463 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxd8P23463 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxd8P23463 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxd8P23463 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxd8P23463 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxd8P23463 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Hoxd8P23463 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxd8P23463 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.71■□□□□ 0.75
Hoxd8P23463 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxd8P23463 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxd8P23463 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxd8P23463 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxd8P23463 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxd8P23463 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Hoxd8P23463 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.7■□□□□ 0.74
Hoxd8P23463 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxd8P23463 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxd8P23463 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.7■□□□□ 0.74
Hoxd8P23463 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxd8P23463 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxd8P23463 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxd8P23463 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxd8P23463 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxd8P23463 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxd8P23463 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxd8P23463 Gm5643-201ENSMUST00000117081 966 ntBASIC19.69■□□□□ 0.74
Hoxd8P23463 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.69■□□□□ 0.74
Hoxd8P23463 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxd8P23463 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxd8P23463 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxd8P23463 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxd8P23463 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxd8P23463 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxd8P23463 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxd8P23463 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Hoxd8P23463 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
Hoxd8P23463 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.68■□□□□ 0.74
Hoxd8P23463 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxd8P23463 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxd8P23463 Gm10812-201ENSMUST00000099864 546 ntBASIC19.68■□□□□ 0.74
Hoxd8P23463 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxd8P23463 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxd8P23463 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.67■□□□□ 0.74
Hoxd8P23463 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.67■□□□□ 0.74
Hoxd8P23463 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxd8P23463 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxd8P23463 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Hoxd8P23463 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxd8P23463 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxd8P23463 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms