Protein–RNA interactions for Protein: A0A1L1SQF0

Uncharacterized protein (Fragment), mousemouse

Predictions only

Length 893 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1L1SQF0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
A0A1L1SQF0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
A0A1L1SQF0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
A0A1L1SQF0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
A0A1L1SQF0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
A0A1L1SQF0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
A0A1L1SQF0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
A0A1L1SQF0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.02
A0A1L1SQF0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
A0A1L1SQF0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
A0A1L1SQF0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
A0A1L1SQF0 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.39■■□□□ 1.01
A0A1L1SQF0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
A0A1L1SQF0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
A0A1L1SQF0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
A0A1L1SQF0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
A0A1L1SQF0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
A0A1L1SQF0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
A0A1L1SQF0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
A0A1L1SQF0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.38■■□□□ 1.01
A0A1L1SQF0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
A0A1L1SQF0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
A0A1L1SQF0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
A0A1L1SQF0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
A0A1L1SQF0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
A0A1L1SQF0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
A0A1L1SQF0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
A0A1L1SQF0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
A0A1L1SQF0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
A0A1L1SQF0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
A0A1L1SQF0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.37■■□□□ 1.01
A0A1L1SQF0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.37■■□□□ 1.01
A0A1L1SQF0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
A0A1L1SQF0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
A0A1L1SQF0 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.37■■□□□ 1.01
A0A1L1SQF0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
A0A1L1SQF0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
A0A1L1SQF0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
A0A1L1SQF0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
A0A1L1SQF0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
A0A1L1SQF0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.36■■□□□ 1.01
A0A1L1SQF0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.36■■□□□ 1.01
A0A1L1SQF0 Gm9847-201ENSMUST00000052528 599 ntBASIC21.36■■□□□ 1.01
A0A1L1SQF0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
A0A1L1SQF0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
A0A1L1SQF0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
A0A1L1SQF0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
A0A1L1SQF0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
A0A1L1SQF0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
A0A1L1SQF0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
A0A1L1SQF0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.35■■□□□ 1.01
A0A1L1SQF0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
A0A1L1SQF0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
A0A1L1SQF0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
A0A1L1SQF0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.35■■□□□ 1.01
A0A1L1SQF0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
A0A1L1SQF0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.35■■□□□ 1.01
A0A1L1SQF0 Spcs1-204ENSMUST00000226782 949 ntBASIC21.35■■□□□ 1.01
A0A1L1SQF0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
A0A1L1SQF0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.35■■□□□ 1.01
A0A1L1SQF0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
A0A1L1SQF0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
A0A1L1SQF0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.35■■□□□ 1.01
A0A1L1SQF0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
A0A1L1SQF0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
A0A1L1SQF0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
A0A1L1SQF0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
A0A1L1SQF0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
A0A1L1SQF0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
A0A1L1SQF0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
A0A1L1SQF0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
A0A1L1SQF0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
A0A1L1SQF0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
A0A1L1SQF0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
A0A1L1SQF0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
A0A1L1SQF0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
A0A1L1SQF0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
A0A1L1SQF0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
A0A1L1SQF0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
A0A1L1SQF0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
A0A1L1SQF0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
A0A1L1SQF0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
A0A1L1SQF0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
A0A1L1SQF0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
A0A1L1SQF0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.33■■□□□ 1
A0A1L1SQF0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
A0A1L1SQF0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.33■■□□□ 1
A0A1L1SQF0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
A0A1L1SQF0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
A0A1L1SQF0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
A0A1L1SQF0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
A0A1L1SQF0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
A0A1L1SQF0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
A0A1L1SQF0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
A0A1L1SQF0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
A0A1L1SQF0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
A0A1L1SQF0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
A0A1L1SQF0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
A0A1L1SQF0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
A0A1L1SQF0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms