Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.53■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Igkv5-45A0A0B4J1J1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.52■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Igkv5-45A0A0B4J1J1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.51■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.51■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Gm4968-201ENSMUST00000071458 858 ntBASIC19.51■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Igkv5-45A0A0B4J1J1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-45A0A0B4J1J1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-45A0A0B4J1J1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.5■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-45A0A0B4J1J1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-45A0A0B4J1J1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-45A0A0B4J1J1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
Igkv5-45A0A0B4J1J1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.49■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.49■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.49■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.48■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.48■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.47■□□□□ 0.71
Igkv5-45A0A0B4J1J1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.46■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Gm12441-201ENSMUST00000121806 588 ntBASIC19.46■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Gm26524-201ENSMUST00000192339 390 ntBASIC19.46■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Igkv5-45A0A0B4J1J1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms