Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-4Q9EQM3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-4Q9EQM3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-4Q9EQM3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-4Q9EQM3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-4Q9EQM3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-4Q9EQM3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nkx2-4Q9EQM3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.67■□□□□ 0.74
Nkx2-4Q9EQM3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.67■□□□□ 0.74
Nkx2-4Q9EQM3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-4Q9EQM3 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.67■□□□□ 0.74
Nkx2-4Q9EQM3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nkx2-4Q9EQM3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-4Q9EQM3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nkx2-4Q9EQM3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-4Q9EQM3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-4Q9EQM3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-4Q9EQM3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-4Q9EQM3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-4Q9EQM3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-4Q9EQM3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.66■□□□□ 0.74
Nkx2-4Q9EQM3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.66■□□□□ 0.74
Nkx2-4Q9EQM3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.66■□□□□ 0.74
Nkx2-4Q9EQM3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.66■□□□□ 0.74
Nkx2-4Q9EQM3 Gm10231-201ENSMUST00000181584 441 ntBASIC19.66■□□□□ 0.74
Nkx2-4Q9EQM3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-4Q9EQM3 Gm10175-202ENSMUST00000208752 441 ntBASIC19.66■□□□□ 0.74
Nkx2-4Q9EQM3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-4Q9EQM3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Nkx2-4Q9EQM3 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.66■□□□□ 0.74
Nkx2-4Q9EQM3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.66■□□□□ 0.74
Nkx2-4Q9EQM3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Nkx2-4Q9EQM3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx2-4Q9EQM3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx2-4Q9EQM3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx2-4Q9EQM3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx2-4Q9EQM3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.65■□□□□ 0.74
Nkx2-4Q9EQM3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.65■□□□□ 0.74
Nkx2-4Q9EQM3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx2-4Q9EQM3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx2-4Q9EQM3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.65■□□□□ 0.74
Nkx2-4Q9EQM3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Nkx2-4Q9EQM3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx2-4Q9EQM3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx2-4Q9EQM3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx2-4Q9EQM3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx2-4Q9EQM3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Nkx2-4Q9EQM3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nkx2-4Q9EQM3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nkx2-4Q9EQM3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nkx2-4Q9EQM3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx2-4Q9EQM3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx2-4Q9EQM3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx2-4Q9EQM3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx2-4Q9EQM3 Gm10819-201ENSMUST00000099988 561 ntBASIC19.64■□□□□ 0.73
Nkx2-4Q9EQM3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx2-4Q9EQM3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx2-4Q9EQM3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx2-4Q9EQM3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx2-4Q9EQM3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx2-4Q9EQM3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx2-4Q9EQM3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx2-4Q9EQM3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx2-4Q9EQM3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Nkx2-4Q9EQM3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Nkx2-4Q9EQM3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx2-4Q9EQM3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Nkx2-4Q9EQM3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-4Q9EQM3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Nkx2-4Q9EQM3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-4Q9EQM3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.62■□□□□ 0.73
Nkx2-4Q9EQM3 Gm6433-201ENSMUST00000118634 875 ntBASIC19.62■□□□□ 0.73
Nkx2-4Q9EQM3 Gm13158-201ENSMUST00000122007 736 ntBASIC19.62■□□□□ 0.73
Nkx2-4Q9EQM3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.62■□□□□ 0.73
Nkx2-4Q9EQM3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-4Q9EQM3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-4Q9EQM3 Gm5417-201ENSMUST00000079706 384 ntBASIC19.62■□□□□ 0.73
Nkx2-4Q9EQM3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-4Q9EQM3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-4Q9EQM3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-4Q9EQM3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-4Q9EQM3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-4Q9EQM3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-4Q9EQM3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-4Q9EQM3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.61■□□□□ 0.73
Nkx2-4Q9EQM3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-4Q9EQM3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-4Q9EQM3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-4Q9EQM3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-4Q9EQM3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.61■□□□□ 0.73
Nkx2-4Q9EQM3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.61■□□□□ 0.73
Nkx2-4Q9EQM3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Nkx2-4Q9EQM3 Mir5122-201ENSMUST00000175004 89 ntBASIC19.61■□□□□ 0.73
Nkx2-4Q9EQM3 Gm43799-201ENSMUST00000201845 579 ntBASIC19.61■□□□□ 0.73
Nkx2-4Q9EQM3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-4Q9EQM3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Nkx2-4Q9EQM3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-4Q9EQM3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-4Q9EQM3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.61■□□□□ 0.73
Nkx2-4Q9EQM3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms