Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rsph3bQ9DA80 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.83■□□□□ 0.93
Rsph3bQ9DA80 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Rsph3bQ9DA80 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rsph3bQ9DA80 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rsph3bQ9DA80 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rsph3bQ9DA80 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rsph3bQ9DA80 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.83■□□□□ 0.92
Rsph3bQ9DA80 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rsph3bQ9DA80 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rsph3bQ9DA80 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rsph3bQ9DA80 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rsph3bQ9DA80 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rsph3bQ9DA80 Gm7290-201ENSMUST00000104990 617 ntBASIC20.82■□□□□ 0.92
Rsph3bQ9DA80 Gm12918-201ENSMUST00000120234 636 ntBASIC20.82■□□□□ 0.92
Rsph3bQ9DA80 Gm15710-201ENSMUST00000121821 636 ntBASIC20.82■□□□□ 0.92
Rsph3bQ9DA80 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.82■□□□□ 0.92
Rsph3bQ9DA80 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rsph3bQ9DA80 Gm5075-201ENSMUST00000196916 622 ntBASIC20.82■□□□□ 0.92
Rsph3bQ9DA80 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rsph3bQ9DA80 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rsph3bQ9DA80 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.82■□□□□ 0.92
Rsph3bQ9DA80 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.82■□□□□ 0.92
Rsph3bQ9DA80 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rsph3bQ9DA80 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rsph3bQ9DA80 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Rsph3bQ9DA80 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rsph3bQ9DA80 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rsph3bQ9DA80 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.82■□□□□ 0.92
Rsph3bQ9DA80 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rsph3bQ9DA80 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rsph3bQ9DA80 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rsph3bQ9DA80 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.81■□□□□ 0.92
Rsph3bQ9DA80 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Rsph3bQ9DA80 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rsph3bQ9DA80 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rsph3bQ9DA80 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rsph3bQ9DA80 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rsph3bQ9DA80 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rsph3bQ9DA80 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Rsph3bQ9DA80 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rsph3bQ9DA80 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rsph3bQ9DA80 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Rsph3bQ9DA80 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rsph3bQ9DA80 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rsph3bQ9DA80 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.8■□□□□ 0.92
Rsph3bQ9DA80 Gm12441-201ENSMUST00000121806 588 ntBASIC20.8■□□□□ 0.92
Rsph3bQ9DA80 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rsph3bQ9DA80 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Rsph3bQ9DA80 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.8■□□□□ 0.92
Rsph3bQ9DA80 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rsph3bQ9DA80 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rsph3bQ9DA80 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.8■□□□□ 0.92
Rsph3bQ9DA80 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rsph3bQ9DA80 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rsph3bQ9DA80 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rsph3bQ9DA80 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rsph3bQ9DA80 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rsph3bQ9DA80 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rsph3bQ9DA80 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rsph3bQ9DA80 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rsph3bQ9DA80 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rsph3bQ9DA80 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rsph3bQ9DA80 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rsph3bQ9DA80 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rsph3bQ9DA80 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rsph3bQ9DA80 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rsph3bQ9DA80 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rsph3bQ9DA80 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rsph3bQ9DA80 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rsph3bQ9DA80 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rsph3bQ9DA80 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rsph3bQ9DA80 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rsph3bQ9DA80 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rsph3bQ9DA80 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Rsph3bQ9DA80 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rsph3bQ9DA80 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rsph3bQ9DA80 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rsph3bQ9DA80 Gm5408-201ENSMUST00000197998 747 ntBASIC20.78■□□□□ 0.92
Rsph3bQ9DA80 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rsph3bQ9DA80 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rsph3bQ9DA80 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Rsph3bQ9DA80 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rsph3bQ9DA80 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rsph3bQ9DA80 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rsph3bQ9DA80 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Rsph3bQ9DA80 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Rsph3bQ9DA80 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.77■□□□□ 0.92
Rsph3bQ9DA80 Gm13148-201ENSMUST00000118892 745 ntBASIC20.77■□□□□ 0.92
Rsph3bQ9DA80 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Rsph3bQ9DA80 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.77■□□□□ 0.92
Rsph3bQ9DA80 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rsph3bQ9DA80 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rsph3bQ9DA80 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rsph3bQ9DA80 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rsph3bQ9DA80 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rsph3bQ9DA80 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rsph3bQ9DA80 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rsph3bQ9DA80 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rsph3bQ9DA80 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms