Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Mbd3l1Q9D9H3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.51■□□□□ 0.23
Mbd3l1Q9D9H3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.51■□□□□ 0.23
Mbd3l1Q9D9H3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Mbd3l1Q9D9H3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mbd3l1Q9D9H3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Mbd3l1Q9D9H3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mbd3l1Q9D9H3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Mbd3l1Q9D9H3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mbd3l1Q9D9H3 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.5■□□□□ 0.23
Mbd3l1Q9D9H3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Mbd3l1Q9D9H3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mbd3l1Q9D9H3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Mbd3l1Q9D9H3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mbd3l1Q9D9H3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mbd3l1Q9D9H3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mbd3l1Q9D9H3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mbd3l1Q9D9H3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Mbd3l1Q9D9H3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Mbd3l1Q9D9H3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mbd3l1Q9D9H3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mbd3l1Q9D9H3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mbd3l1Q9D9H3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.49■□□□□ 0.23
Mbd3l1Q9D9H3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mbd3l1Q9D9H3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Mbd3l1Q9D9H3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mbd3l1Q9D9H3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Mbd3l1Q9D9H3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mbd3l1Q9D9H3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mbd3l1Q9D9H3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mbd3l1Q9D9H3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mbd3l1Q9D9H3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mbd3l1Q9D9H3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Mbd3l1Q9D9H3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mbd3l1Q9D9H3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mbd3l1Q9D9H3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mbd3l1Q9D9H3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mbd3l1Q9D9H3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.47■□□□□ 0.23
Mbd3l1Q9D9H3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mbd3l1Q9D9H3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mbd3l1Q9D9H3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mbd3l1Q9D9H3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Mbd3l1Q9D9H3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Mbd3l1Q9D9H3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mbd3l1Q9D9H3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mbd3l1Q9D9H3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mbd3l1Q9D9H3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mbd3l1Q9D9H3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mbd3l1Q9D9H3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Mbd3l1Q9D9H3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mbd3l1Q9D9H3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mbd3l1Q9D9H3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Mbd3l1Q9D9H3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mbd3l1Q9D9H3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Mbd3l1Q9D9H3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Mbd3l1Q9D9H3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.46■□□□□ 0.23
Mbd3l1Q9D9H3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mbd3l1Q9D9H3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Mbd3l1Q9D9H3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mbd3l1Q9D9H3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Mbd3l1Q9D9H3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Mbd3l1Q9D9H3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Mbd3l1Q9D9H3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.45■□□□□ 0.22
Mbd3l1Q9D9H3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mbd3l1Q9D9H3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mbd3l1Q9D9H3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Mbd3l1Q9D9H3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mbd3l1Q9D9H3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mbd3l1Q9D9H3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mbd3l1Q9D9H3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mbd3l1Q9D9H3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Mbd3l1Q9D9H3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mbd3l1Q9D9H3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mbd3l1Q9D9H3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mbd3l1Q9D9H3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms