Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Rnf138Q9CQE0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf138Q9CQE0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.91■□□□□ 0.46
Rnf138Q9CQE0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf138Q9CQE0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf138Q9CQE0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Rnf138Q9CQE0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf138Q9CQE0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf138Q9CQE0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf138Q9CQE0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Rnf138Q9CQE0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf138Q9CQE0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.91■□□□□ 0.46
Rnf138Q9CQE0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf138Q9CQE0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf138Q9CQE0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf138Q9CQE0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf138Q9CQE0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf138Q9CQE0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf138Q9CQE0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf138Q9CQE0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf138Q9CQE0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf138Q9CQE0 Gm26524-201ENSMUST00000192339 390 ntBASIC17.9■□□□□ 0.46
Rnf138Q9CQE0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.9■□□□□ 0.46
Rnf138Q9CQE0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf138Q9CQE0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf138Q9CQE0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf138Q9CQE0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf138Q9CQE0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf138Q9CQE0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf138Q9CQE0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf138Q9CQE0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf138Q9CQE0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf138Q9CQE0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rnf138Q9CQE0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Rnf138Q9CQE0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf138Q9CQE0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf138Q9CQE0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf138Q9CQE0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Rnf138Q9CQE0 Gm12441-201ENSMUST00000121806 588 ntBASIC17.89■□□□□ 0.45
Rnf138Q9CQE0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.89■□□□□ 0.45
Rnf138Q9CQE0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf138Q9CQE0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Rnf138Q9CQE0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Rnf138Q9CQE0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf138Q9CQE0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf138Q9CQE0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf138Q9CQE0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf138Q9CQE0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rnf138Q9CQE0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.89■□□□□ 0.45
Rnf138Q9CQE0 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.89■□□□□ 0.45
Rnf138Q9CQE0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.88■□□□□ 0.45
Rnf138Q9CQE0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf138Q9CQE0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf138Q9CQE0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Rnf138Q9CQE0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf138Q9CQE0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.88■□□□□ 0.45
Rnf138Q9CQE0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.88■□□□□ 0.45
Rnf138Q9CQE0 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.88■□□□□ 0.45
Rnf138Q9CQE0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf138Q9CQE0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf138Q9CQE0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf138Q9CQE0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf138Q9CQE0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf138Q9CQE0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Rnf138Q9CQE0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf138Q9CQE0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf138Q9CQE0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf138Q9CQE0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf138Q9CQE0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
Rnf138Q9CQE0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf138Q9CQE0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf138Q9CQE0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf138Q9CQE0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf138Q9CQE0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf138Q9CQE0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rnf138Q9CQE0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf138Q9CQE0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Rnf138Q9CQE0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Rnf138Q9CQE0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf138Q9CQE0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf138Q9CQE0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.86■□□□□ 0.45
Rnf138Q9CQE0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf138Q9CQE0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf138Q9CQE0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf138Q9CQE0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Rnf138Q9CQE0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf138Q9CQE0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf138Q9CQE0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf138Q9CQE0 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.86■□□□□ 0.45
Rnf138Q9CQE0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Rnf138Q9CQE0 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.85■□□□□ 0.45
Rnf138Q9CQE0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf138Q9CQE0 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.85■□□□□ 0.45
Rnf138Q9CQE0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf138Q9CQE0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf138Q9CQE0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf138Q9CQE0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf138Q9CQE0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf138Q9CQE0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Rnf138Q9CQE0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms