Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Clp1Q99LI9 Gm13836-201ENSMUST00000121159 501 ntBASIC20.23■□□□□ 0.83
Clp1Q99LI9 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.23■□□□□ 0.83
Clp1Q99LI9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.23■□□□□ 0.83
Clp1Q99LI9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clp1Q99LI9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clp1Q99LI9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clp1Q99LI9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clp1Q99LI9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clp1Q99LI9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clp1Q99LI9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clp1Q99LI9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clp1Q99LI9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clp1Q99LI9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Clp1Q99LI9 Gm44549-201ENSMUST00000208351 577 ntBASIC20.22■□□□□ 0.83
Clp1Q99LI9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clp1Q99LI9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clp1Q99LI9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.22■□□□□ 0.83
Clp1Q99LI9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.22■□□□□ 0.83
Clp1Q99LI9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clp1Q99LI9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.21■□□□□ 0.83
Clp1Q99LI9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Clp1Q99LI9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.21■□□□□ 0.83
Clp1Q99LI9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Clp1Q99LI9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clp1Q99LI9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Clp1Q99LI9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clp1Q99LI9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clp1Q99LI9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clp1Q99LI9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Clp1Q99LI9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Clp1Q99LI9 Gm11249-201ENSMUST00000117071 859 ntBASIC20.2■□□□□ 0.82
Clp1Q99LI9 Gm715-201ENSMUST00000117865 831 ntBASIC20.2■□□□□ 0.82
Clp1Q99LI9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Clp1Q99LI9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Clp1Q99LI9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clp1Q99LI9 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.2■□□□□ 0.82
Clp1Q99LI9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Clp1Q99LI9 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.2■□□□□ 0.82
Clp1Q99LI9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clp1Q99LI9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clp1Q99LI9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.2■□□□□ 0.82
Clp1Q99LI9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clp1Q99LI9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clp1Q99LI9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clp1Q99LI9 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.19■□□□□ 0.82
Clp1Q99LI9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Clp1Q99LI9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clp1Q99LI9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Clp1Q99LI9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clp1Q99LI9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clp1Q99LI9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Clp1Q99LI9 Gm18666-201ENSMUST00000190039 958 ntBASIC20.19■□□□□ 0.82
Clp1Q99LI9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clp1Q99LI9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clp1Q99LI9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
Clp1Q99LI9 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.19■□□□□ 0.82
Clp1Q99LI9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Clp1Q99LI9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clp1Q99LI9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clp1Q99LI9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Clp1Q99LI9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Clp1Q99LI9 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.18■□□□□ 0.82
Clp1Q99LI9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clp1Q99LI9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.18■□□□□ 0.82
Clp1Q99LI9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.18■□□□□ 0.82
Clp1Q99LI9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clp1Q99LI9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clp1Q99LI9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Clp1Q99LI9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clp1Q99LI9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clp1Q99LI9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clp1Q99LI9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clp1Q99LI9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Clp1Q99LI9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Clp1Q99LI9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clp1Q99LI9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Clp1Q99LI9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clp1Q99LI9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Clp1Q99LI9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Clp1Q99LI9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clp1Q99LI9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Clp1Q99LI9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clp1Q99LI9 Gm10698-201ENSMUST00000182663 604 ntBASIC20.16■□□□□ 0.82
Clp1Q99LI9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Clp1Q99LI9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.16■□□□□ 0.82
Clp1Q99LI9 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.16■□□□□ 0.82
Clp1Q99LI9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clp1Q99LI9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clp1Q99LI9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Clp1Q99LI9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Clp1Q99LI9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.15■□□□□ 0.82
Clp1Q99LI9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Clp1Q99LI9 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.15■□□□□ 0.82
Clp1Q99LI9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clp1Q99LI9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Clp1Q99LI9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clp1Q99LI9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Clp1Q99LI9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Clp1Q99LI9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms