Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
VcanQ62059 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VcanQ62059 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.12■□□□□ 0.49
VcanQ62059 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VcanQ62059 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.12■□□□□ 0.49
VcanQ62059 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VcanQ62059 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VcanQ62059 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VcanQ62059 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VcanQ62059 Gm6345-202ENSMUST00000180900 204 ntBASIC18.11■□□□□ 0.49
VcanQ62059 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.11■□□□□ 0.49
VcanQ62059 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VcanQ62059 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VcanQ62059 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VcanQ62059 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.11■□□□□ 0.49
VcanQ62059 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VcanQ62059 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VcanQ62059 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.11■□□□□ 0.49
VcanQ62059 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
VcanQ62059 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VcanQ62059 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VcanQ62059 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VcanQ62059 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VcanQ62059 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VcanQ62059 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VcanQ62059 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VcanQ62059 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VcanQ62059 Gm13559-201ENSMUST00000120476 863 ntBASIC18.1■□□□□ 0.49
VcanQ62059 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VcanQ62059 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VcanQ62059 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.1■□□□□ 0.49
VcanQ62059 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VcanQ62059 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VcanQ62059 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
VcanQ62059 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VcanQ62059 Gm18666-201ENSMUST00000190039 958 ntBASIC18.1■□□□□ 0.49
VcanQ62059 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VcanQ62059 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.09■□□□□ 0.49
VcanQ62059 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VcanQ62059 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.09■□□□□ 0.49
VcanQ62059 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
VcanQ62059 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VcanQ62059 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VcanQ62059 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VcanQ62059 Gm5867-201ENSMUST00000063197 592 ntBASIC18.08■□□□□ 0.48
VcanQ62059 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.08■□□□□ 0.48
VcanQ62059 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.08■□□□□ 0.48
VcanQ62059 Gm9103-201ENSMUST00000119371 405 ntBASIC18.08■□□□□ 0.48
VcanQ62059 Gm33142-201ENSMUST00000193913 867 ntBASIC18.08■□□□□ 0.48
VcanQ62059 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VcanQ62059 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
VcanQ62059 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VcanQ62059 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
VcanQ62059 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.07■□□□□ 0.48
VcanQ62059 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VcanQ62059 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.07■□□□□ 0.48
VcanQ62059 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.07■□□□□ 0.48
VcanQ62059 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
VcanQ62059 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
VcanQ62059 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VcanQ62059 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VcanQ62059 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VcanQ62059 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VcanQ62059 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VcanQ62059 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VcanQ62059 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VcanQ62059 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VcanQ62059 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
VcanQ62059 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VcanQ62059 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.06■□□□□ 0.48
VcanQ62059 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
VcanQ62059 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VcanQ62059 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
VcanQ62059 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VcanQ62059 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VcanQ62059 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.06■□□□□ 0.48
VcanQ62059 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VcanQ62059 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VcanQ62059 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
VcanQ62059 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VcanQ62059 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VcanQ62059 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VcanQ62059 Gm2399-201ENSMUST00000104944 225 ntBASIC18.05■□□□□ 0.48
VcanQ62059 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VcanQ62059 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VcanQ62059 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
VcanQ62059 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VcanQ62059 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.05■□□□□ 0.48
VcanQ62059 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VcanQ62059 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VcanQ62059 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VcanQ62059 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
VcanQ62059 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VcanQ62059 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VcanQ62059 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VcanQ62059 Gm23634-201ENSMUST00000175071 91 ntBASIC18.05■□□□□ 0.48
VcanQ62059 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
VcanQ62059 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VcanQ62059 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VcanQ62059 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms