Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clns1aQ61189 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clns1aQ61189 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Clns1aQ61189 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clns1aQ61189 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clns1aQ61189 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clns1aQ61189 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clns1aQ61189 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clns1aQ61189 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Clns1aQ61189 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Clns1aQ61189 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clns1aQ61189 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clns1aQ61189 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clns1aQ61189 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Clns1aQ61189 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.28■□□□□ 0.2
Clns1aQ61189 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clns1aQ61189 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.28■□□□□ 0.2
Clns1aQ61189 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Clns1aQ61189 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.28■□□□□ 0.2
Clns1aQ61189 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clns1aQ61189 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clns1aQ61189 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Clns1aQ61189 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clns1aQ61189 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.28■□□□□ 0.2
Clns1aQ61189 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clns1aQ61189 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clns1aQ61189 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clns1aQ61189 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clns1aQ61189 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clns1aQ61189 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clns1aQ61189 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clns1aQ61189 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clns1aQ61189 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clns1aQ61189 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clns1aQ61189 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clns1aQ61189 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clns1aQ61189 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clns1aQ61189 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Clns1aQ61189 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clns1aQ61189 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Clns1aQ61189 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clns1aQ61189 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clns1aQ61189 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clns1aQ61189 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clns1aQ61189 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.27■□□□□ 0.19
Clns1aQ61189 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Clns1aQ61189 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clns1aQ61189 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clns1aQ61189 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clns1aQ61189 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clns1aQ61189 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Clns1aQ61189 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clns1aQ61189 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clns1aQ61189 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.26■□□□□ 0.19
Clns1aQ61189 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clns1aQ61189 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clns1aQ61189 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clns1aQ61189 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clns1aQ61189 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clns1aQ61189 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clns1aQ61189 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Clns1aQ61189 Grk6-206ENSMUST00000224995 2971 ntBASIC16.25■□□□□ 0.19
Clns1aQ61189 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Clns1aQ61189 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clns1aQ61189 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Clns1aQ61189 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clns1aQ61189 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clns1aQ61189 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Clns1aQ61189 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clns1aQ61189 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clns1aQ61189 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clns1aQ61189 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clns1aQ61189 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clns1aQ61189 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clns1aQ61189 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clns1aQ61189 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Clns1aQ61189 AA386476-201ENSMUST00000098781 1665 ntBASIC16.24■□□□□ 0.19
Clns1aQ61189 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.24■□□□□ 0.19
Clns1aQ61189 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clns1aQ61189 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clns1aQ61189 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clns1aQ61189 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clns1aQ61189 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.24■□□□□ 0.19
Clns1aQ61189 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clns1aQ61189 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.24■□□□□ 0.19
Clns1aQ61189 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clns1aQ61189 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clns1aQ61189 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clns1aQ61189 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.23■□□□□ 0.19
Clns1aQ61189 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clns1aQ61189 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clns1aQ61189 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clns1aQ61189 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Clns1aQ61189 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Clns1aQ61189 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Clns1aQ61189 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clns1aQ61189 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clns1aQ61189 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Clns1aQ61189 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clns1aQ61189 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms