Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Gm18284-201ENSMUST00000172604 624 ntBASIC17.53■□□□□ 0.4
Col10a1Q05306 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
Col10a1Q05306 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col10a1Q05306 Gm5874-201ENSMUST00000096101 508 ntBASIC17.53■□□□□ 0.4
Col10a1Q05306 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col10a1Q05306 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col10a1Q05306 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col10a1Q05306 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col10a1Q05306 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col10a1Q05306 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col10a1Q05306 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Col10a1Q05306 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col10a1Q05306 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Col10a1Q05306 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col10a1Q05306 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col10a1Q05306 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col10a1Q05306 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col10a1Q05306 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col10a1Q05306 Reep4-203ENSMUST00000226563 1444 ntBASIC17.52■□□□□ 0.4
Col10a1Q05306 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col10a1Q05306 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col10a1Q05306 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Col10a1Q05306 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Col10a1Q05306 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col10a1Q05306 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.52■□□□□ 0.39
Col10a1Q05306 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col10a1Q05306 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.51■□□□□ 0.39
Col10a1Q05306 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col10a1Q05306 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col10a1Q05306 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.51■□□□□ 0.39
Col10a1Q05306 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col10a1Q05306 Gm7860-201ENSMUST00000121190 879 ntBASIC17.51■□□□□ 0.39
Col10a1Q05306 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col10a1Q05306 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col10a1Q05306 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col10a1Q05306 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Col10a1Q05306 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col10a1Q05306 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col10a1Q05306 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Col10a1Q05306 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Col10a1Q05306 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col10a1Q05306 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col10a1Q05306 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col10a1Q05306 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.5■□□□□ 0.39
Col10a1Q05306 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col10a1Q05306 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col10a1Q05306 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col10a1Q05306 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col10a1Q05306 Gm38205-201ENSMUST00000192243 258 ntBASIC17.5■□□□□ 0.39
Col10a1Q05306 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.5■□□□□ 0.39
Col10a1Q05306 Gm42778-201ENSMUST00000199644 553 ntBASIC17.5■□□□□ 0.39
Col10a1Q05306 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col10a1Q05306 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Col10a1Q05306 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Col10a1Q05306 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Col10a1Q05306 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col10a1Q05306 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col10a1Q05306 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col10a1Q05306 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col10a1Q05306 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.49■□□□□ 0.39
Col10a1Q05306 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col10a1Q05306 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Col10a1Q05306 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Col10a1Q05306 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Col10a1Q05306 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col10a1Q05306 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col10a1Q05306 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col10a1Q05306 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Col10a1Q05306 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col10a1Q05306 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.49■□□□□ 0.39
Col10a1Q05306 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col10a1Q05306 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col10a1Q05306 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col10a1Q05306 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col10a1Q05306 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col10a1Q05306 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col10a1Q05306 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Col10a1Q05306 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.48■□□□□ 0.39
Col10a1Q05306 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col10a1Q05306 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Col10a1Q05306 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.48■□□□□ 0.39
Col10a1Q05306 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col10a1Q05306 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Col10a1Q05306 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col10a1Q05306 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col10a1Q05306 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col10a1Q05306 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col10a1Q05306 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col10a1Q05306 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col10a1Q05306 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.47■□□□□ 0.39
Col10a1Q05306 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col10a1Q05306 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col10a1Q05306 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col10a1Q05306 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.47■□□□□ 0.39
Col10a1Q05306 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col10a1Q05306 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.47■□□□□ 0.39
Col10a1Q05306 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.47■□□□□ 0.39
Col10a1Q05306 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col10a1Q05306 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.47■□□□□ 0.39
Col10a1Q05306 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms