Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cd27P41272 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd27P41272 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd27P41272 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd27P41272 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd27P41272 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cd27P41272 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd27P41272 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.28■□□□□ 0.04
Cd27P41272 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd27P41272 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cd27P41272 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd27P41272 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd27P41272 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cd27P41272 Gm10033-202ENSMUST00000211874 928 ntBASIC15.28■□□□□ 0.04
Cd27P41272 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cd27P41272 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd27P41272 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd27P41272 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd27P41272 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd27P41272 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd27P41272 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd27P41272 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cd27P41272 Gm13146-201ENSMUST00000118508 780 ntBASIC15.27■□□□□ 0.04
Cd27P41272 Gm13234-201ENSMUST00000120010 747 ntBASIC15.27■□□□□ 0.04
Cd27P41272 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cd27P41272 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cd27P41272 Gm26571-201ENSMUST00000181399 666 ntBASIC15.27■□□□□ 0.04
Cd27P41272 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd27P41272 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd27P41272 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd27P41272 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.27■□□□□ 0.04
Cd27P41272 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd27P41272 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd27P41272 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd27P41272 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cd27P41272 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd27P41272 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.27■□□□□ 0.03
Cd27P41272 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd27P41272 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cd27P41272 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Cd27P41272 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd27P41272 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.26■□□□□ 0.03
Cd27P41272 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cd27P41272 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd27P41272 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd27P41272 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd27P41272 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cd27P41272 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd27P41272 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cd27P41272 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd27P41272 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Cd27P41272 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.25■□□□□ 0.03
Cd27P41272 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.25■□□□□ 0.03
Cd27P41272 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.25■□□□□ 0.03
Cd27P41272 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd27P41272 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.25■□□□□ 0.03
Cd27P41272 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.25■□□□□ 0.03
Cd27P41272 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd27P41272 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd27P41272 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd27P41272 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cd27P41272 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd27P41272 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cd27P41272 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cd27P41272 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd27P41272 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd27P41272 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd27P41272 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd27P41272 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd27P41272 Gm8495-201ENSMUST00000188740 694 ntBASIC15.24■□□□□ 0.03
Cd27P41272 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd27P41272 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd27P41272 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd27P41272 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd27P41272 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cd27P41272 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.24■□□□□ 0.03
Cd27P41272 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd27P41272 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd27P41272 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cd27P41272 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd27P41272 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd27P41272 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd27P41272 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd27P41272 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cd27P41272 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.23■□□□□ 0.03
Cd27P41272 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd27P41272 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd27P41272 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd27P41272 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.23■□□□□ 0.03
Cd27P41272 Gm42642-201ENSMUST00000200683 355 ntBASIC15.23■□□□□ 0.03
Cd27P41272 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.23■□□□□ 0.03
Cd27P41272 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cd27P41272 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd27P41272 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd27P41272 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd27P41272 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.23■□□□□ 0.03
Cd27P41272 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd27P41272 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd27P41272 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd27P41272 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 168 ms