Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dkk1O54908 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dkk1O54908 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dkk1O54908 Gm22923-201ENSMUST00000174952 110 ntBASIC16.51■□□□□ 0.23
Dkk1O54908 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Dkk1O54908 AC114573.1-201ENSMUST00000224120 1210 ntBASIC16.51■□□□□ 0.23
Dkk1O54908 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dkk1O54908 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Dkk1O54908 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.51■□□□□ 0.23
Dkk1O54908 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Dkk1O54908 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Dkk1O54908 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Dkk1O54908 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Dkk1O54908 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dkk1O54908 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dkk1O54908 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Dkk1O54908 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.5■□□□□ 0.23
Dkk1O54908 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Dkk1O54908 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.5■□□□□ 0.23
Dkk1O54908 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.5■□□□□ 0.23
Dkk1O54908 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Dkk1O54908 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dkk1O54908 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dkk1O54908 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dkk1O54908 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Dkk1O54908 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dkk1O54908 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.49■□□□□ 0.23
Dkk1O54908 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.49■□□□□ 0.23
Dkk1O54908 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dkk1O54908 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dkk1O54908 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Dkk1O54908 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Dkk1O54908 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Dkk1O54908 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC16.49■□□□□ 0.23
Dkk1O54908 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC16.49■□□□□ 0.23
Dkk1O54908 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.49■□□□□ 0.23
Dkk1O54908 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.49■□□□□ 0.23
Dkk1O54908 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dkk1O54908 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.49■□□□□ 0.23
Dkk1O54908 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dkk1O54908 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Dkk1O54908 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.49■□□□□ 0.23
Dkk1O54908 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dkk1O54908 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dkk1O54908 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Dkk1O54908 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dkk1O54908 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Dkk1O54908 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dkk1O54908 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Dkk1O54908 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.48■□□□□ 0.23
Dkk1O54908 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dkk1O54908 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
Dkk1O54908 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Dkk1O54908 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dkk1O54908 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.48■□□□□ 0.23
Dkk1O54908 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.48■□□□□ 0.23
Dkk1O54908 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Dkk1O54908 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dkk1O54908 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Dkk1O54908 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Dkk1O54908 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Dkk1O54908 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Dkk1O54908 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Dkk1O54908 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.47■□□□□ 0.23
Dkk1O54908 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC16.47■□□□□ 0.23
Dkk1O54908 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.47■□□□□ 0.23
Dkk1O54908 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.47■□□□□ 0.23
Dkk1O54908 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Dkk1O54908 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Dkk1O54908 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Dkk1O54908 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Dkk1O54908 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Dkk1O54908 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Dkk1O54908 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Dkk1O54908 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Dkk1O54908 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Dkk1O54908 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Dkk1O54908 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Dkk1O54908 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Dkk1O54908 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Dkk1O54908 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Dkk1O54908 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC16.46■□□□□ 0.23
Dkk1O54908 Gm10493-201ENSMUST00000097270 612 ntBASIC16.46■□□□□ 0.23
Dkk1O54908 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Dkk1O54908 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Dkk1O54908 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Dkk1O54908 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Dkk1O54908 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Dkk1O54908 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Dkk1O54908 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dkk1O54908 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Dkk1O54908 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Dkk1O54908 Golph3-202ENSMUST00000226517 2359 ntBASIC16.45■□□□□ 0.22
Dkk1O54908 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dkk1O54908 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Dkk1O54908 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dkk1O54908 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dkk1O54908 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Dkk1O54908 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.45■□□□□ 0.22
Dkk1O54908 Gm14740-201ENSMUST00000118538 1150 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms