Protein–RNA interactions for Protein: A2ACT7

Col9a3, Collagen, type IX, alpha 3, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3A2ACT7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.69■□□□□ 0.58
Col9a3A2ACT7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col9a3A2ACT7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col9a3A2ACT7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col9a3A2ACT7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col9a3A2ACT7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col9a3A2ACT7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col9a3A2ACT7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Col9a3A2ACT7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Col9a3A2ACT7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col9a3A2ACT7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Col9a3A2ACT7 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.68■□□□□ 0.58
Col9a3A2ACT7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col9a3A2ACT7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.68■□□□□ 0.58
Col9a3A2ACT7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col9a3A2ACT7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col9a3A2ACT7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col9a3A2ACT7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col9a3A2ACT7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col9a3A2ACT7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col9a3A2ACT7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col9a3A2ACT7 Gm22325-201ENSMUST00000158904 308 ntBASIC18.67■□□□□ 0.58
Col9a3A2ACT7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.67■□□□□ 0.58
Col9a3A2ACT7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.67■□□□□ 0.58
Col9a3A2ACT7 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.67■□□□□ 0.58
Col9a3A2ACT7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.67■□□□□ 0.58
Col9a3A2ACT7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Col9a3A2ACT7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col9a3A2ACT7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col9a3A2ACT7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col9a3A2ACT7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col9a3A2ACT7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col9a3A2ACT7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col9a3A2ACT7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col9a3A2ACT7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col9a3A2ACT7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col9a3A2ACT7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col9a3A2ACT7 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col9a3A2ACT7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Col9a3A2ACT7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col9a3A2ACT7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col9a3A2ACT7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col9a3A2ACT7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col9a3A2ACT7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col9a3A2ACT7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col9a3A2ACT7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.65■□□□□ 0.58
Col9a3A2ACT7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.65■□□□□ 0.58
Col9a3A2ACT7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col9a3A2ACT7 Gm2559-201ENSMUST00000201323 363 ntBASIC18.65■□□□□ 0.58
Col9a3A2ACT7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.65■□□□□ 0.58
Col9a3A2ACT7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col9a3A2ACT7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col9a3A2ACT7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.65■□□□□ 0.58
Col9a3A2ACT7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col9a3A2ACT7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col9a3A2ACT7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col9a3A2ACT7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col9a3A2ACT7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Col9a3A2ACT7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.64■□□□□ 0.57
Col9a3A2ACT7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col9a3A2ACT7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col9a3A2ACT7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col9a3A2ACT7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col9a3A2ACT7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Col9a3A2ACT7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col9a3A2ACT7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.64■□□□□ 0.57
Col9a3A2ACT7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col9a3A2ACT7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.64■□□□□ 0.57
Col9a3A2ACT7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col9a3A2ACT7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col9a3A2ACT7 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.64■□□□□ 0.57
Col9a3A2ACT7 Dio3-201ENSMUST00000097228 1449 ntBASIC18.64■□□□□ 0.57
Col9a3A2ACT7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col9a3A2ACT7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col9a3A2ACT7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col9a3A2ACT7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col9a3A2ACT7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col9a3A2ACT7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col9a3A2ACT7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col9a3A2ACT7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Col9a3A2ACT7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Col9a3A2ACT7 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.63■□□□□ 0.57
Col9a3A2ACT7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Col9a3A2ACT7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col9a3A2ACT7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col9a3A2ACT7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col9a3A2ACT7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col9a3A2ACT7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col9a3A2ACT7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col9a3A2ACT7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col9a3A2ACT7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.62■□□□□ 0.57
Col9a3A2ACT7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.62■□□□□ 0.57
Col9a3A2ACT7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Col9a3A2ACT7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col9a3A2ACT7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col9a3A2ACT7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col9a3A2ACT7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col9a3A2ACT7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.61■□□□□ 0.57
Col9a3A2ACT7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col9a3A2ACT7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms