Protein–RNA interactions for Protein: A0A140T8R2

Vma21-ps, Vacuolar ATPase assembly integral membrane protein VMA21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21-psA0A140T8R2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vma21-psA0A140T8R2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Vma21-psA0A140T8R2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vma21-psA0A140T8R2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vma21-psA0A140T8R2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vma21-psA0A140T8R2 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.2■□□□□ 0.02
Vma21-psA0A140T8R2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vma21-psA0A140T8R2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vma21-psA0A140T8R2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Vma21-psA0A140T8R2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vma21-psA0A140T8R2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vma21-psA0A140T8R2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vma21-psA0A140T8R2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vma21-psA0A140T8R2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vma21-psA0A140T8R2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Vma21-psA0A140T8R2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vma21-psA0A140T8R2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Vma21-psA0A140T8R2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vma21-psA0A140T8R2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vma21-psA0A140T8R2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vma21-psA0A140T8R2 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.19■□□□□ 0.02
Vma21-psA0A140T8R2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vma21-psA0A140T8R2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vma21-psA0A140T8R2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vma21-psA0A140T8R2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vma21-psA0A140T8R2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.19■□□□□ 0.02
Vma21-psA0A140T8R2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vma21-psA0A140T8R2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vma21-psA0A140T8R2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vma21-psA0A140T8R2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vma21-psA0A140T8R2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Vma21-psA0A140T8R2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vma21-psA0A140T8R2 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.18■□□□□ 0.02
Vma21-psA0A140T8R2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vma21-psA0A140T8R2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.18■□□□□ 0.02
Vma21-psA0A140T8R2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vma21-psA0A140T8R2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vma21-psA0A140T8R2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Vma21-psA0A140T8R2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vma21-psA0A140T8R2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.18■□□□□ 0.02
Vma21-psA0A140T8R2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vma21-psA0A140T8R2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vma21-psA0A140T8R2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Vma21-psA0A140T8R2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vma21-psA0A140T8R2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vma21-psA0A140T8R2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vma21-psA0A140T8R2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Vma21-psA0A140T8R2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vma21-psA0A140T8R2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vma21-psA0A140T8R2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Vma21-psA0A140T8R2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Vma21-psA0A140T8R2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vma21-psA0A140T8R2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vma21-psA0A140T8R2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vma21-psA0A140T8R2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vma21-psA0A140T8R2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vma21-psA0A140T8R2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.17■□□□□ 0.02
Vma21-psA0A140T8R2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vma21-psA0A140T8R2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Vma21-psA0A140T8R2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vma21-psA0A140T8R2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vma21-psA0A140T8R2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vma21-psA0A140T8R2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vma21-psA0A140T8R2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vma21-psA0A140T8R2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vma21-psA0A140T8R2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vma21-psA0A140T8R2 Gm9847-201ENSMUST00000052528 599 ntBASIC15.16■□□□□ 0.02
Vma21-psA0A140T8R2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vma21-psA0A140T8R2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Vma21-psA0A140T8R2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Vma21-psA0A140T8R2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vma21-psA0A140T8R2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vma21-psA0A140T8R2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vma21-psA0A140T8R2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vma21-psA0A140T8R2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.16■□□□□ 0.02
Vma21-psA0A140T8R2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vma21-psA0A140T8R2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vma21-psA0A140T8R2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.15■□□□□ 0.02
Vma21-psA0A140T8R2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vma21-psA0A140T8R2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Vma21-psA0A140T8R2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vma21-psA0A140T8R2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vma21-psA0A140T8R2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Vma21-psA0A140T8R2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vma21-psA0A140T8R2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Vma21-psA0A140T8R2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vma21-psA0A140T8R2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vma21-psA0A140T8R2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vma21-psA0A140T8R2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vma21-psA0A140T8R2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21-psA0A140T8R2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21-psA0A140T8R2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21-psA0A140T8R2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21-psA0A140T8R2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21-psA0A140T8R2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21-psA0A140T8R2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21-psA0A140T8R2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vma21-psA0A140T8R2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.14■□□□□ 0.01
Vma21-psA0A140T8R2 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.14■□□□□ 0.01
Vma21-psA0A140T8R2 Serp2-204ENSMUST00000228055 705 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms