Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav17A0A075B655 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav17A0A075B655 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav17A0A075B655 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav17A0A075B655 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Trav17A0A075B655 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav17A0A075B655 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.14■□□□□ 0.01
Trav17A0A075B655 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav17A0A075B655 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav17A0A075B655 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav17A0A075B655 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav17A0A075B655 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
Trav17A0A075B655 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav17A0A075B655 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.14■□□□□ 0.01
Trav17A0A075B655 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav17A0A075B655 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav17A0A075B655 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav17A0A075B655 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav17A0A075B655 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav17A0A075B655 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav17A0A075B655 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.13■□□□□ 0.01
Trav17A0A075B655 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav17A0A075B655 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav17A0A075B655 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav17A0A075B655 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav17A0A075B655 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Trav17A0A075B655 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav17A0A075B655 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Trav17A0A075B655 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.13■□□□□ 0.01
Trav17A0A075B655 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav17A0A075B655 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav17A0A075B655 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav17A0A075B655 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav17A0A075B655 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Trav17A0A075B655 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav17A0A075B655 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Trav17A0A075B655 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav17A0A075B655 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav17A0A075B655 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav17A0A075B655 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Trav17A0A075B655 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav17A0A075B655 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav17A0A075B655 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav17A0A075B655 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.12■□□□□ 0.01
Trav17A0A075B655 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav17A0A075B655 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav17A0A075B655 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav17A0A075B655 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav17A0A075B655 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav17A0A075B655 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav17A0A075B655 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav17A0A075B655 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.11■□□□□ 0.01
Trav17A0A075B655 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav17A0A075B655 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav17A0A075B655 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.11■□□□□ 0.01
Trav17A0A075B655 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Trav17A0A075B655 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav17A0A075B655 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav17A0A075B655 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav17A0A075B655 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav17A0A075B655 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav17A0A075B655 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav17A0A075B655 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav17A0A075B655 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav17A0A075B655 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.1■□□□□ 0.01
Trav17A0A075B655 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Trav17A0A075B655 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav17A0A075B655 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav17A0A075B655 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav17A0A075B655 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.1■□□□□ 0.01
Trav17A0A075B655 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.1■□□□□ 0.01
Trav17A0A075B655 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav17A0A075B655 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav17A0A075B655 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav17A0A075B655 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav17A0A075B655 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav17A0A075B655 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav17A0A075B655 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav17A0A075B655 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav17A0A075B655 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav17A0A075B655 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav17A0A075B655 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav17A0A075B655 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav17A0A075B655 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav17A0A075B655 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav17A0A075B655 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav17A0A075B655 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav17A0A075B655 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav17A0A075B655 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Trav17A0A075B655 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC15.09■□□□□ 0.01
Trav17A0A075B655 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.09■□□□□ 0.01
Trav17A0A075B655 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.09■□□□□ 0.01
Trav17A0A075B655 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav17A0A075B655 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav17A0A075B655 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.09■□□□□ 0.01
Trav17A0A075B655 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav17A0A075B655 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav17A0A075B655 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav17A0A075B655 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav17A0A075B655 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms