Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav10A0A075B642 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav10A0A075B642 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav10A0A075B642 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav10A0A075B642 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav10A0A075B642 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav10A0A075B642 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav10A0A075B642 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav10A0A075B642 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav10A0A075B642 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trav10A0A075B642 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav10A0A075B642 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav10A0A075B642 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
Trav10A0A075B642 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav10A0A075B642 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav10A0A075B642 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav10A0A075B642 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav10A0A075B642 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav10A0A075B642 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav10A0A075B642 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav10A0A075B642 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav10A0A075B642 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav10A0A075B642 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav10A0A075B642 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav10A0A075B642 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trav10A0A075B642 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav10A0A075B642 Gm27801-201ENSMUST00000184174 223 ntBASIC16.86■□□□□ 0.29
Trav10A0A075B642 Gm43060-201ENSMUST00000200621 289 ntBASIC16.86■□□□□ 0.29
Trav10A0A075B642 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.86■□□□□ 0.29
Trav10A0A075B642 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav10A0A075B642 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav10A0A075B642 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav10A0A075B642 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav10A0A075B642 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav10A0A075B642 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav10A0A075B642 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav10A0A075B642 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav10A0A075B642 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav10A0A075B642 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav10A0A075B642 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav10A0A075B642 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.85■□□□□ 0.29
Trav10A0A075B642 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trav10A0A075B642 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trav10A0A075B642 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.85■□□□□ 0.29
Trav10A0A075B642 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Trav10A0A075B642 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.85■□□□□ 0.29
Trav10A0A075B642 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.85■□□□□ 0.29
Trav10A0A075B642 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.85■□□□□ 0.29
Trav10A0A075B642 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav10A0A075B642 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.85■□□□□ 0.29
Trav10A0A075B642 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav10A0A075B642 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav10A0A075B642 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav10A0A075B642 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav10A0A075B642 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav10A0A075B642 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trav10A0A075B642 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav10A0A075B642 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav10A0A075B642 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav10A0A075B642 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trav10A0A075B642 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav10A0A075B642 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav10A0A075B642 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav10A0A075B642 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav10A0A075B642 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav10A0A075B642 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav10A0A075B642 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav10A0A075B642 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav10A0A075B642 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trav10A0A075B642 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav10A0A075B642 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav10A0A075B642 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trav10A0A075B642 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Trav10A0A075B642 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trav10A0A075B642 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav10A0A075B642 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Trav10A0A075B642 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav10A0A075B642 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav10A0A075B642 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav10A0A075B642 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trav10A0A075B642 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trav10A0A075B642 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav10A0A075B642 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trav10A0A075B642 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav10A0A075B642 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav10A0A075B642 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.82■□□□□ 0.28
Trav10A0A075B642 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav10A0A075B642 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav10A0A075B642 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav10A0A075B642 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav10A0A075B642 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav10A0A075B642 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav10A0A075B642 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trav10A0A075B642 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav10A0A075B642 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav10A0A075B642 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav10A0A075B642 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trav10A0A075B642 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav10A0A075B642 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav10A0A075B642 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms