Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.27■□□□□ 0.36
H2afb1S4R1E0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2afb1S4R1E0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
H2afb1S4R1E0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.27■□□□□ 0.35
H2afb1S4R1E0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
H2afb1S4R1E0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
H2afb1S4R1E0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
H2afb1S4R1E0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
H2afb1S4R1E0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
H2afb1S4R1E0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb1S4R1E0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb1S4R1E0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb1S4R1E0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.26■□□□□ 0.35
H2afb1S4R1E0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.26■□□□□ 0.35
H2afb1S4R1E0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
H2afb1S4R1E0 Golgb1-201ENSMUST00000023534 498 ntBASIC17.26■□□□□ 0.35
H2afb1S4R1E0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb1S4R1E0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb1S4R1E0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb1S4R1E0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
H2afb1S4R1E0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb1S4R1E0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb1S4R1E0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
H2afb1S4R1E0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb1S4R1E0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb1S4R1E0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb1S4R1E0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb1S4R1E0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb1S4R1E0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb1S4R1E0 Gm12922-201ENSMUST00000120626 809 ntBASIC17.25■□□□□ 0.35
H2afb1S4R1E0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.25■□□□□ 0.35
H2afb1S4R1E0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.25■□□□□ 0.35
H2afb1S4R1E0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb1S4R1E0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb1S4R1E0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb1S4R1E0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb1S4R1E0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb1S4R1E0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb1S4R1E0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.25■□□□□ 0.35
H2afb1S4R1E0 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.24■□□□□ 0.35
H2afb1S4R1E0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
H2afb1S4R1E0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
H2afb1S4R1E0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H2afb1S4R1E0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H2afb1S4R1E0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
H2afb1S4R1E0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.24■□□□□ 0.35
H2afb1S4R1E0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
H2afb1S4R1E0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
H2afb1S4R1E0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
H2afb1S4R1E0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H2afb1S4R1E0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb1S4R1E0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
H2afb1S4R1E0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb1S4R1E0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb1S4R1E0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb1S4R1E0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb1S4R1E0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb1S4R1E0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb1S4R1E0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb1S4R1E0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
H2afb1S4R1E0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb1S4R1E0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb1S4R1E0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb1S4R1E0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb1S4R1E0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb1S4R1E0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb1S4R1E0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb1S4R1E0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
H2afb1S4R1E0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.22■□□□□ 0.35
H2afb1S4R1E0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.22■□□□□ 0.35
H2afb1S4R1E0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb1S4R1E0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb1S4R1E0 Rarb-207ENSMUST00000225921 2756 ntBASIC17.22■□□□□ 0.35
H2afb1S4R1E0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.22■□□□□ 0.35
H2afb1S4R1E0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb1S4R1E0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb1S4R1E0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb1S4R1E0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb1S4R1E0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb1S4R1E0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb1S4R1E0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb1S4R1E0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb1S4R1E0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb1S4R1E0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb1S4R1E0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb1S4R1E0 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.21■□□□□ 0.35
H2afb1S4R1E0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb1S4R1E0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb1S4R1E0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb1S4R1E0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb1S4R1E0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb1S4R1E0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
H2afb1S4R1E0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
H2afb1S4R1E0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
H2afb1S4R1E0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H2afb1S4R1E0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
H2afb1S4R1E0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H2afb1S4R1E0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
H2afb1S4R1E0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
H2afb1S4R1E0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms