Protein–RNA interactions for Protein: Q9R013

Ctsf, Cathepsin F, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtsfQ9R013 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CtsfQ9R013 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CtsfQ9R013 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CtsfQ9R013 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CtsfQ9R013 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CtsfQ9R013 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CtsfQ9R013 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CtsfQ9R013 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.75■□□□□ 0.91
CtsfQ9R013 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.75■□□□□ 0.91
CtsfQ9R013 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CtsfQ9R013 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CtsfQ9R013 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CtsfQ9R013 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CtsfQ9R013 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CtsfQ9R013 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CtsfQ9R013 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.74■□□□□ 0.91
CtsfQ9R013 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CtsfQ9R013 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CtsfQ9R013 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CtsfQ9R013 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CtsfQ9R013 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CtsfQ9R013 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CtsfQ9R013 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CtsfQ9R013 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CtsfQ9R013 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CtsfQ9R013 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.73■□□□□ 0.91
CtsfQ9R013 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CtsfQ9R013 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CtsfQ9R013 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.73■□□□□ 0.91
CtsfQ9R013 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.73■□□□□ 0.91
CtsfQ9R013 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CtsfQ9R013 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CtsfQ9R013 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CtsfQ9R013 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CtsfQ9R013 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.72■□□□□ 0.91
CtsfQ9R013 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.72■□□□□ 0.91
CtsfQ9R013 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CtsfQ9R013 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CtsfQ9R013 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CtsfQ9R013 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CtsfQ9R013 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CtsfQ9R013 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CtsfQ9R013 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CtsfQ9R013 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CtsfQ9R013 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CtsfQ9R013 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CtsfQ9R013 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CtsfQ9R013 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CtsfQ9R013 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.71■□□□□ 0.91
CtsfQ9R013 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CtsfQ9R013 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.71■□□□□ 0.91
CtsfQ9R013 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CtsfQ9R013 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CtsfQ9R013 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CtsfQ9R013 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CtsfQ9R013 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
CtsfQ9R013 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CtsfQ9R013 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CtsfQ9R013 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CtsfQ9R013 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CtsfQ9R013 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CtsfQ9R013 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CtsfQ9R013 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.7■□□□□ 0.9
CtsfQ9R013 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CtsfQ9R013 Gm4968-201ENSMUST00000071458 858 ntBASIC20.7■□□□□ 0.9
CtsfQ9R013 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CtsfQ9R013 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CtsfQ9R013 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CtsfQ9R013 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.7■□□□□ 0.9
CtsfQ9R013 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CtsfQ9R013 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CtsfQ9R013 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CtsfQ9R013 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CtsfQ9R013 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CtsfQ9R013 Gm38205-201ENSMUST00000192243 258 ntBASIC20.69■□□□□ 0.9
CtsfQ9R013 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CtsfQ9R013 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CtsfQ9R013 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CtsfQ9R013 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CtsfQ9R013 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CtsfQ9R013 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CtsfQ9R013 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CtsfQ9R013 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.68■□□□□ 0.9
CtsfQ9R013 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CtsfQ9R013 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CtsfQ9R013 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CtsfQ9R013 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CtsfQ9R013 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CtsfQ9R013 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CtsfQ9R013 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CtsfQ9R013 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.68■□□□□ 0.9
CtsfQ9R013 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CtsfQ9R013 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CtsfQ9R013 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CtsfQ9R013 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CtsfQ9R013 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CtsfQ9R013 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
CtsfQ9R013 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
CtsfQ9R013 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CtsfQ9R013 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms