Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Gm6420-201ENSMUST00000193885 723 ntBASIC20.93■□□□□ 0.94
Rsph3bQ9DA80 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rsph3bQ9DA80 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rsph3bQ9DA80 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.93■□□□□ 0.94
Rsph3bQ9DA80 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Rsph3bQ9DA80 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
Rsph3bQ9DA80 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rsph3bQ9DA80 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rsph3bQ9DA80 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rsph3bQ9DA80 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rsph3bQ9DA80 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Rsph3bQ9DA80 Gm7860-201ENSMUST00000121190 879 ntBASIC20.92■□□□□ 0.94
Rsph3bQ9DA80 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.92■□□□□ 0.94
Rsph3bQ9DA80 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rsph3bQ9DA80 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rsph3bQ9DA80 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rsph3bQ9DA80 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
Rsph3bQ9DA80 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rsph3bQ9DA80 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rsph3bQ9DA80 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rsph3bQ9DA80 Nespas-201ENSMUST00000143738 1083 ntBASIC20.91■□□□□ 0.94
Rsph3bQ9DA80 Gm27011-201ENSMUST00000182352 972 ntBASIC20.91■□□□□ 0.94
Rsph3bQ9DA80 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.91■□□□□ 0.94
Rsph3bQ9DA80 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.91■□□□□ 0.94
Rsph3bQ9DA80 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rsph3bQ9DA80 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Rsph3bQ9DA80 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Rsph3bQ9DA80 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rsph3bQ9DA80 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rsph3bQ9DA80 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.9■□□□□ 0.94
Rsph3bQ9DA80 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rsph3bQ9DA80 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rsph3bQ9DA80 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.9■□□□□ 0.94
Rsph3bQ9DA80 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rsph3bQ9DA80 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rsph3bQ9DA80 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rsph3bQ9DA80 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.9■□□□□ 0.94
Rsph3bQ9DA80 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rsph3bQ9DA80 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rsph3bQ9DA80 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rsph3bQ9DA80 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rsph3bQ9DA80 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.89■□□□□ 0.94
Rsph3bQ9DA80 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rsph3bQ9DA80 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rsph3bQ9DA80 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Rsph3bQ9DA80 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rsph3bQ9DA80 Gm13534-201ENSMUST00000121169 513 ntBASIC20.89■□□□□ 0.93
Rsph3bQ9DA80 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.89■□□□□ 0.93
Rsph3bQ9DA80 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Rsph3bQ9DA80 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rsph3bQ9DA80 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rsph3bQ9DA80 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.89■□□□□ 0.93
Rsph3bQ9DA80 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rsph3bQ9DA80 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rsph3bQ9DA80 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Rsph3bQ9DA80 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rsph3bQ9DA80 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Rsph3bQ9DA80 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.88■□□□□ 0.93
Rsph3bQ9DA80 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rsph3bQ9DA80 Gm6365-201ENSMUST00000054711 744 ntBASIC20.88■□□□□ 0.93
Rsph3bQ9DA80 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Rsph3bQ9DA80 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rsph3bQ9DA80 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rsph3bQ9DA80 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rsph3bQ9DA80 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.88■□□□□ 0.93
Rsph3bQ9DA80 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rsph3bQ9DA80 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rsph3bQ9DA80 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rsph3bQ9DA80 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.87■□□□□ 0.93
Rsph3bQ9DA80 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.87■□□□□ 0.93
Rsph3bQ9DA80 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.87■□□□□ 0.93
Rsph3bQ9DA80 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rsph3bQ9DA80 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Rsph3bQ9DA80 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rsph3bQ9DA80 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rsph3bQ9DA80 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rsph3bQ9DA80 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rsph3bQ9DA80 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.86■□□□□ 0.93
Rsph3bQ9DA80 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rsph3bQ9DA80 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rsph3bQ9DA80 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rsph3bQ9DA80 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rsph3bQ9DA80 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.85■□□□□ 0.93
Rsph3bQ9DA80 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Rsph3bQ9DA80 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Rsph3bQ9DA80 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rsph3bQ9DA80 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rsph3bQ9DA80 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.85■□□□□ 0.93
Rsph3bQ9DA80 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rsph3bQ9DA80 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rsph3bQ9DA80 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rsph3bQ9DA80 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rsph3bQ9DA80 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rsph3bQ9DA80 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rsph3bQ9DA80 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
Rsph3bQ9DA80 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rsph3bQ9DA80 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.83■□□□□ 0.93
Rsph3bQ9DA80 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Rsph3bQ9DA80 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.83■□□□□ 0.93
Rsph3bQ9DA80 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms