Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf7Q8BTV2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf7Q8BTV2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf7Q8BTV2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf7Q8BTV2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.15■□□□□ 0.66
Cpsf7Q8BTV2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf7Q8BTV2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Cpsf7Q8BTV2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf7Q8BTV2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf7Q8BTV2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf7Q8BTV2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf7Q8BTV2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.15■□□□□ 0.66
Cpsf7Q8BTV2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf7Q8BTV2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Cpsf7Q8BTV2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.14■□□□□ 0.65
Cpsf7Q8BTV2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cpsf7Q8BTV2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.14■□□□□ 0.65
Cpsf7Q8BTV2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cpsf7Q8BTV2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.14■□□□□ 0.65
Cpsf7Q8BTV2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf7Q8BTV2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf7Q8BTV2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf7Q8BTV2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf7Q8BTV2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf7Q8BTV2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf7Q8BTV2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Cpsf7Q8BTV2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf7Q8BTV2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.13■□□□□ 0.65
Cpsf7Q8BTV2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf7Q8BTV2 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.13■□□□□ 0.65
Cpsf7Q8BTV2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf7Q8BTV2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cpsf7Q8BTV2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf7Q8BTV2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf7Q8BTV2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf7Q8BTV2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf7Q8BTV2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf7Q8BTV2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf7Q8BTV2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf7Q8BTV2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf7Q8BTV2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf7Q8BTV2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf7Q8BTV2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.12■□□□□ 0.65
Cpsf7Q8BTV2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf7Q8BTV2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf7Q8BTV2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf7Q8BTV2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf7Q8BTV2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf7Q8BTV2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf7Q8BTV2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf7Q8BTV2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf7Q8BTV2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf7Q8BTV2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.11■□□□□ 0.65
Cpsf7Q8BTV2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.11■□□□□ 0.65
Cpsf7Q8BTV2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf7Q8BTV2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf7Q8BTV2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf7Q8BTV2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf7Q8BTV2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf7Q8BTV2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf7Q8BTV2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf7Q8BTV2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf7Q8BTV2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Cpsf7Q8BTV2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.1■□□□□ 0.65
Cpsf7Q8BTV2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.1■□□□□ 0.65
Cpsf7Q8BTV2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Cpsf7Q8BTV2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf7Q8BTV2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf7Q8BTV2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf7Q8BTV2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf7Q8BTV2 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.1■□□□□ 0.65
Cpsf7Q8BTV2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf7Q8BTV2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.09■□□□□ 0.65
Cpsf7Q8BTV2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf7Q8BTV2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Cpsf7Q8BTV2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf7Q8BTV2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf7Q8BTV2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf7Q8BTV2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Cpsf7Q8BTV2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf7Q8BTV2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf7Q8BTV2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf7Q8BTV2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cpsf7Q8BTV2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cpsf7Q8BTV2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cpsf7Q8BTV2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cpsf7Q8BTV2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cpsf7Q8BTV2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cpsf7Q8BTV2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.08■□□□□ 0.65
Cpsf7Q8BTV2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.08■□□□□ 0.64
Cpsf7Q8BTV2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Cpsf7Q8BTV2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cpsf7Q8BTV2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cpsf7Q8BTV2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cpsf7Q8BTV2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf7Q8BTV2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf7Q8BTV2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf7Q8BTV2 Gm22238-201ENSMUST00000175222 88 ntBASIC19.07■□□□□ 0.64
Cpsf7Q8BTV2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf7Q8BTV2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms