Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trappc6aQ78XR0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.97■□□□□ 0.63
Trappc6aQ78XR0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Trappc6aQ78XR0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trappc6aQ78XR0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.97■□□□□ 0.63
Trappc6aQ78XR0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trappc6aQ78XR0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trappc6aQ78XR0 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.97■□□□□ 0.63
Trappc6aQ78XR0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trappc6aQ78XR0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trappc6aQ78XR0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Trappc6aQ78XR0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trappc6aQ78XR0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trappc6aQ78XR0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trappc6aQ78XR0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trappc6aQ78XR0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Trappc6aQ78XR0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.96■□□□□ 0.63
Trappc6aQ78XR0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trappc6aQ78XR0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trappc6aQ78XR0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trappc6aQ78XR0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.96■□□□□ 0.63
Trappc6aQ78XR0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trappc6aQ78XR0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trappc6aQ78XR0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trappc6aQ78XR0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trappc6aQ78XR0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.95■□□□□ 0.62
Trappc6aQ78XR0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trappc6aQ78XR0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trappc6aQ78XR0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trappc6aQ78XR0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.95■□□□□ 0.62
Trappc6aQ78XR0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.95■□□□□ 0.62
Trappc6aQ78XR0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Trappc6aQ78XR0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Trappc6aQ78XR0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trappc6aQ78XR0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trappc6aQ78XR0 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.95■□□□□ 0.62
Trappc6aQ78XR0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.95■□□□□ 0.62
Trappc6aQ78XR0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trappc6aQ78XR0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trappc6aQ78XR0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trappc6aQ78XR0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trappc6aQ78XR0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trappc6aQ78XR0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.95■□□□□ 0.62
Trappc6aQ78XR0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trappc6aQ78XR0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.94■□□□□ 0.62
Trappc6aQ78XR0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trappc6aQ78XR0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Trappc6aQ78XR0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trappc6aQ78XR0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trappc6aQ78XR0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trappc6aQ78XR0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trappc6aQ78XR0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trappc6aQ78XR0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trappc6aQ78XR0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trappc6aQ78XR0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trappc6aQ78XR0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trappc6aQ78XR0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.93■□□□□ 0.62
Trappc6aQ78XR0 Rab3c-203ENSMUST00000224180 967 ntBASIC18.93■□□□□ 0.62
Trappc6aQ78XR0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.93■□□□□ 0.62
Trappc6aQ78XR0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.93■□□□□ 0.62
Trappc6aQ78XR0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trappc6aQ78XR0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trappc6aQ78XR0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trappc6aQ78XR0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trappc6aQ78XR0 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.92■□□□□ 0.62
Trappc6aQ78XR0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trappc6aQ78XR0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trappc6aQ78XR0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.92■□□□□ 0.62
Trappc6aQ78XR0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trappc6aQ78XR0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trappc6aQ78XR0 Mir7071-201ENSMUST00000184847 69 ntBASIC18.92■□□□□ 0.62
Trappc6aQ78XR0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trappc6aQ78XR0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trappc6aQ78XR0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trappc6aQ78XR0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Trappc6aQ78XR0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.92■□□□□ 0.62
Trappc6aQ78XR0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trappc6aQ78XR0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trappc6aQ78XR0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trappc6aQ78XR0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Trappc6aQ78XR0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trappc6aQ78XR0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Trappc6aQ78XR0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trappc6aQ78XR0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trappc6aQ78XR0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.91■□□□□ 0.62
Trappc6aQ78XR0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trappc6aQ78XR0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trappc6aQ78XR0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trappc6aQ78XR0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trappc6aQ78XR0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trappc6aQ78XR0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trappc6aQ78XR0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trappc6aQ78XR0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trappc6aQ78XR0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trappc6aQ78XR0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trappc6aQ78XR0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Trappc6aQ78XR0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trappc6aQ78XR0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trappc6aQ78XR0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.9■□□□□ 0.62
Trappc6aQ78XR0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms