Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VcanQ62059 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VcanQ62059 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VcanQ62059 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VcanQ62059 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
VcanQ62059 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VcanQ62059 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VcanQ62059 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VcanQ62059 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VcanQ62059 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VcanQ62059 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
VcanQ62059 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
VcanQ62059 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.2■□□□□ 0.5
VcanQ62059 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VcanQ62059 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
VcanQ62059 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.2■□□□□ 0.5
VcanQ62059 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VcanQ62059 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VcanQ62059 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VcanQ62059 Ank2-226ENSMUST00000189368 339 ntBASIC18.2■□□□□ 0.5
VcanQ62059 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
VcanQ62059 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
VcanQ62059 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
VcanQ62059 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VcanQ62059 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
VcanQ62059 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VcanQ62059 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VcanQ62059 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VcanQ62059 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VcanQ62059 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VcanQ62059 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VcanQ62059 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.19■□□□□ 0.5
VcanQ62059 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VcanQ62059 Gm15378-201ENSMUST00000121894 207 ntBASIC18.19■□□□□ 0.5
VcanQ62059 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
VcanQ62059 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VcanQ62059 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VcanQ62059 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.19■□□□□ 0.5
VcanQ62059 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
VcanQ62059 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VcanQ62059 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
VcanQ62059 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.18■□□□□ 0.5
VcanQ62059 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VcanQ62059 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VcanQ62059 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VcanQ62059 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
VcanQ62059 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
VcanQ62059 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
VcanQ62059 Gm7461-201ENSMUST00000058918 827 ntBASIC18.17■□□□□ 0.5
VcanQ62059 Gm5417-201ENSMUST00000079706 384 ntBASIC18.17■□□□□ 0.5
VcanQ62059 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
VcanQ62059 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.17■□□□□ 0.5
VcanQ62059 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VcanQ62059 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
VcanQ62059 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VcanQ62059 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VcanQ62059 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VcanQ62059 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.16■□□□□ 0.5
VcanQ62059 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.16■□□□□ 0.5
VcanQ62059 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
VcanQ62059 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VcanQ62059 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VcanQ62059 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VcanQ62059 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VcanQ62059 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VcanQ62059 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VcanQ62059 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
VcanQ62059 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VcanQ62059 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
VcanQ62059 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VcanQ62059 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.15■□□□□ 0.5
VcanQ62059 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VcanQ62059 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VcanQ62059 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.14■□□□□ 0.5
VcanQ62059 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
VcanQ62059 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VcanQ62059 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.14■□□□□ 0.49
VcanQ62059 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VcanQ62059 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VcanQ62059 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VcanQ62059 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VcanQ62059 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.14■□□□□ 0.49
VcanQ62059 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.13■□□□□ 0.49
VcanQ62059 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.13■□□□□ 0.49
VcanQ62059 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VcanQ62059 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VcanQ62059 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.13■□□□□ 0.49
VcanQ62059 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VcanQ62059 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.13■□□□□ 0.49
VcanQ62059 Gm44771-201ENSMUST00000206975 626 ntBASIC18.13■□□□□ 0.49
VcanQ62059 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VcanQ62059 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VcanQ62059 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VcanQ62059 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.13■□□□□ 0.49
VcanQ62059 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VcanQ62059 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
VcanQ62059 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VcanQ62059 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VcanQ62059 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VcanQ62059 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms