Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Thumpd3P97770 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Thumpd3P97770 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Thumpd3P97770 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Thumpd3P97770 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.37■□□□□ 0.69
Thumpd3P97770 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Thumpd3P97770 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Thumpd3P97770 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Thumpd3P97770 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.37■□□□□ 0.69
Thumpd3P97770 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Thumpd3P97770 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Thumpd3P97770 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Thumpd3P97770 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Thumpd3P97770 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Thumpd3P97770 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Thumpd3P97770 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Thumpd3P97770 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Thumpd3P97770 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.36■□□□□ 0.69
Thumpd3P97770 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Thumpd3P97770 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Thumpd3P97770 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Thumpd3P97770 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Thumpd3P97770 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Thumpd3P97770 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Thumpd3P97770 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Thumpd3P97770 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Thumpd3P97770 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Thumpd3P97770 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.35■□□□□ 0.69
Thumpd3P97770 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Thumpd3P97770 Mir7075-201ENSMUST00000184187 82 ntBASIC19.35■□□□□ 0.69
Thumpd3P97770 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Thumpd3P97770 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Thumpd3P97770 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Thumpd3P97770 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Thumpd3P97770 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.34■□□□□ 0.69
Thumpd3P97770 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.34■□□□□ 0.69
Thumpd3P97770 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Thumpd3P97770 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Thumpd3P97770 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Thumpd3P97770 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.34■□□□□ 0.69
Thumpd3P97770 Gm6139-201ENSMUST00000079261 882 ntBASIC19.34■□□□□ 0.69
Thumpd3P97770 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Thumpd3P97770 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Thumpd3P97770 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Thumpd3P97770 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Thumpd3P97770 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Thumpd3P97770 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Thumpd3P97770 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Thumpd3P97770 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.33■□□□□ 0.68
Thumpd3P97770 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Thumpd3P97770 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Thumpd3P97770 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
Thumpd3P97770 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Thumpd3P97770 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Thumpd3P97770 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Thumpd3P97770 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Thumpd3P97770 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Thumpd3P97770 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Thumpd3P97770 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.33■□□□□ 0.68
Thumpd3P97770 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Thumpd3P97770 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Thumpd3P97770 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Thumpd3P97770 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Thumpd3P97770 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.32■□□□□ 0.68
Thumpd3P97770 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Thumpd3P97770 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Thumpd3P97770 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.32■□□□□ 0.68
Thumpd3P97770 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Thumpd3P97770 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Thumpd3P97770 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Thumpd3P97770 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Thumpd3P97770 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Thumpd3P97770 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.32■□□□□ 0.68
Thumpd3P97770 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Thumpd3P97770 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Thumpd3P97770 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Thumpd3P97770 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Thumpd3P97770 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Thumpd3P97770 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Thumpd3P97770 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Thumpd3P97770 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.31■□□□□ 0.68
Thumpd3P97770 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Thumpd3P97770 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Thumpd3P97770 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Thumpd3P97770 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Thumpd3P97770 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Thumpd3P97770 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Thumpd3P97770 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Thumpd3P97770 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Thumpd3P97770 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Thumpd3P97770 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Thumpd3P97770 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Thumpd3P97770 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Thumpd3P97770 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Thumpd3P97770 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Thumpd3P97770 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Thumpd3P97770 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Thumpd3P97770 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.3■□□□□ 0.68
Thumpd3P97770 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.3■□□□□ 0.68
Thumpd3P97770 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms