Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.93■□□□□ 0.78
Hoxd8P23463 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxd8P23463 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxd8P23463 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxd8P23463 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Hoxd8P23463 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxd8P23463 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxd8P23463 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxd8P23463 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxd8P23463 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxd8P23463 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxd8P23463 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxd8P23463 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxd8P23463 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxd8P23463 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxd8P23463 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Hoxd8P23463 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxd8P23463 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxd8P23463 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxd8P23463 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxd8P23463 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxd8P23463 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.91■□□□□ 0.78
Hoxd8P23463 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.91■□□□□ 0.78
Hoxd8P23463 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxd8P23463 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxd8P23463 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Hoxd8P23463 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Hoxd8P23463 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Hoxd8P23463 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxd8P23463 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxd8P23463 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.91■□□□□ 0.78
Hoxd8P23463 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxd8P23463 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.9■□□□□ 0.78
Hoxd8P23463 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.9■□□□□ 0.78
Hoxd8P23463 Gm7977-201ENSMUST00000193787 748 ntBASIC19.9■□□□□ 0.78
Hoxd8P23463 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.9■□□□□ 0.78
Hoxd8P23463 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Hoxd8P23463 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxd8P23463 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxd8P23463 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Hoxd8P23463 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxd8P23463 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxd8P23463 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxd8P23463 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Hoxd8P23463 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.89■□□□□ 0.77
Hoxd8P23463 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxd8P23463 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.89■□□□□ 0.77
Hoxd8P23463 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxd8P23463 Mir7071-201ENSMUST00000184847 69 ntBASIC19.88■□□□□ 0.77
Hoxd8P23463 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxd8P23463 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxd8P23463 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxd8P23463 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxd8P23463 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxd8P23463 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxd8P23463 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxd8P23463 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxd8P23463 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxd8P23463 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxd8P23463 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxd8P23463 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxd8P23463 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Hoxd8P23463 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.87■□□□□ 0.77
Hoxd8P23463 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.87■□□□□ 0.77
Hoxd8P23463 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Hoxd8P23463 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxd8P23463 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.87■□□□□ 0.77
Hoxd8P23463 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.87■□□□□ 0.77
Hoxd8P23463 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxd8P23463 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxd8P23463 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxd8P23463 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.87■□□□□ 0.77
Hoxd8P23463 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxd8P23463 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxd8P23463 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxd8P23463 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxd8P23463 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxd8P23463 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Hoxd8P23463 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxd8P23463 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxd8P23463 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxd8P23463 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.86■□□□□ 0.77
Hoxd8P23463 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxd8P23463 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxd8P23463 Gm13168-201ENSMUST00000121771 632 ntBASIC19.86■□□□□ 0.77
Hoxd8P23463 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxd8P23463 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxd8P23463 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxd8P23463 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxd8P23463 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Hoxd8P23463 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.85■□□□□ 0.77
Hoxd8P23463 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.85■□□□□ 0.77
Hoxd8P23463 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
Hoxd8P23463 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.85■□□□□ 0.77
Hoxd8P23463 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.85■□□□□ 0.77
Hoxd8P23463 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Hoxd8P23463 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Hoxd8P23463 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.85■□□□□ 0.77
Hoxd8P23463 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Hoxd8P23463 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms