Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Gm7143-201ENSMUST00000222811 859 ntBASIC17.64■□□□□ 0.41
Hps1O08983 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hps1O08983 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hps1O08983 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hps1O08983 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hps1O08983 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Hps1O08983 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hps1O08983 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.64■□□□□ 0.41
Hps1O08983 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.64■□□□□ 0.41
Hps1O08983 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hps1O08983 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hps1O08983 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.63■□□□□ 0.41
Hps1O08983 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hps1O08983 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hps1O08983 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.63■□□□□ 0.41
Hps1O08983 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.63■□□□□ 0.41
Hps1O08983 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hps1O08983 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Hps1O08983 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Hps1O08983 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hps1O08983 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Hps1O08983 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hps1O08983 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hps1O08983 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hps1O08983 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hps1O08983 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hps1O08983 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hps1O08983 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Hps1O08983 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Hps1O08983 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Hps1O08983 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.62■□□□□ 0.41
Hps1O08983 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Hps1O08983 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Hps1O08983 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hps1O08983 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hps1O08983 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hps1O08983 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hps1O08983 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hps1O08983 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hps1O08983 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.61■□□□□ 0.41
Hps1O08983 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hps1O08983 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hps1O08983 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Hps1O08983 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hps1O08983 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hps1O08983 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hps1O08983 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Hps1O08983 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hps1O08983 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hps1O08983 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hps1O08983 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hps1O08983 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hps1O08983 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.6■□□□□ 0.41
Hps1O08983 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hps1O08983 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Hps1O08983 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hps1O08983 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hps1O08983 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hps1O08983 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hps1O08983 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hps1O08983 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Hps1O08983 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hps1O08983 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hps1O08983 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Hps1O08983 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.6■□□□□ 0.41
Hps1O08983 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps1O08983 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps1O08983 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps1O08983 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps1O08983 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps1O08983 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.59■□□□□ 0.41
Hps1O08983 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps1O08983 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps1O08983 Gm29257-201ENSMUST00000186115 639 ntBASIC17.59■□□□□ 0.41
Hps1O08983 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps1O08983 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Hps1O08983 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps1O08983 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hps1O08983 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps1O08983 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps1O08983 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hps1O08983 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Hps1O08983 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hps1O08983 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hps1O08983 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hps1O08983 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hps1O08983 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hps1O08983 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hps1O08983 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.58■□□□□ 0.4
Hps1O08983 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.58■□□□□ 0.4
Hps1O08983 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.58■□□□□ 0.4
Hps1O08983 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hps1O08983 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hps1O08983 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hps1O08983 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Hps1O08983 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Hps1O08983 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Hps1O08983 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.58■□□□□ 0.4
Hps1O08983 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hps1O08983 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 158 ms