Protein–RNA interactions for Protein: A0A140T8R2

Vma21-ps, Vacuolar ATPase assembly integral membrane protein VMA21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21-psA0A140T8R2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vma21-psA0A140T8R2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vma21-psA0A140T8R2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.26■□□□□ 0.03
Vma21-psA0A140T8R2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vma21-psA0A140T8R2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vma21-psA0A140T8R2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vma21-psA0A140T8R2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Vma21-psA0A140T8R2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vma21-psA0A140T8R2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vma21-psA0A140T8R2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vma21-psA0A140T8R2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Vma21-psA0A140T8R2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Vma21-psA0A140T8R2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Vma21-psA0A140T8R2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.25■□□□□ 0.03
Vma21-psA0A140T8R2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vma21-psA0A140T8R2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vma21-psA0A140T8R2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vma21-psA0A140T8R2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vma21-psA0A140T8R2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vma21-psA0A140T8R2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vma21-psA0A140T8R2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vma21-psA0A140T8R2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Vma21-psA0A140T8R2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vma21-psA0A140T8R2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.24■□□□□ 0.03
Vma21-psA0A140T8R2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vma21-psA0A140T8R2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vma21-psA0A140T8R2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vma21-psA0A140T8R2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.24■□□□□ 0.03
Vma21-psA0A140T8R2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vma21-psA0A140T8R2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vma21-psA0A140T8R2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vma21-psA0A140T8R2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vma21-psA0A140T8R2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vma21-psA0A140T8R2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vma21-psA0A140T8R2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vma21-psA0A140T8R2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vma21-psA0A140T8R2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vma21-psA0A140T8R2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vma21-psA0A140T8R2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Vma21-psA0A140T8R2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vma21-psA0A140T8R2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vma21-psA0A140T8R2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vma21-psA0A140T8R2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vma21-psA0A140T8R2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vma21-psA0A140T8R2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Vma21-psA0A140T8R2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Vma21-psA0A140T8R2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Vma21-psA0A140T8R2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vma21-psA0A140T8R2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vma21-psA0A140T8R2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vma21-psA0A140T8R2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vma21-psA0A140T8R2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.23■□□□□ 0.03
Vma21-psA0A140T8R2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.23■□□□□ 0.03
Vma21-psA0A140T8R2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.23■□□□□ 0.03
Vma21-psA0A140T8R2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.23■□□□□ 0.03
Vma21-psA0A140T8R2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vma21-psA0A140T8R2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vma21-psA0A140T8R2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vma21-psA0A140T8R2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vma21-psA0A140T8R2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vma21-psA0A140T8R2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Vma21-psA0A140T8R2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.22■□□□□ 0.03
Vma21-psA0A140T8R2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vma21-psA0A140T8R2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vma21-psA0A140T8R2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vma21-psA0A140T8R2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vma21-psA0A140T8R2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Vma21-psA0A140T8R2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vma21-psA0A140T8R2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vma21-psA0A140T8R2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vma21-psA0A140T8R2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vma21-psA0A140T8R2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Vma21-psA0A140T8R2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Vma21-psA0A140T8R2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vma21-psA0A140T8R2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.22■□□□□ 0.03
Vma21-psA0A140T8R2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vma21-psA0A140T8R2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vma21-psA0A140T8R2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.21■□□□□ 0.03
Vma21-psA0A140T8R2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Vma21-psA0A140T8R2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Vma21-psA0A140T8R2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vma21-psA0A140T8R2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.21■□□□□ 0.03
Vma21-psA0A140T8R2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vma21-psA0A140T8R2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vma21-psA0A140T8R2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vma21-psA0A140T8R2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vma21-psA0A140T8R2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vma21-psA0A140T8R2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Vma21-psA0A140T8R2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vma21-psA0A140T8R2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vma21-psA0A140T8R2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Vma21-psA0A140T8R2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Vma21-psA0A140T8R2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Vma21-psA0A140T8R2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Vma21-psA0A140T8R2 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.2■□□□□ 0.02
Vma21-psA0A140T8R2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vma21-psA0A140T8R2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vma21-psA0A140T8R2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vma21-psA0A140T8R2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vma21-psA0A140T8R2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms