Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav10A0A075B642 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav10A0A075B642 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav10A0A075B642 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trav10A0A075B642 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav10A0A075B642 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav10A0A075B642 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav10A0A075B642 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Trav10A0A075B642 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav10A0A075B642 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.94■□□□□ 0.3
Trav10A0A075B642 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav10A0A075B642 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav10A0A075B642 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trav10A0A075B642 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.94■□□□□ 0.3
Trav10A0A075B642 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav10A0A075B642 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav10A0A075B642 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav10A0A075B642 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav10A0A075B642 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav10A0A075B642 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav10A0A075B642 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav10A0A075B642 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav10A0A075B642 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Trav10A0A075B642 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav10A0A075B642 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav10A0A075B642 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.93■□□□□ 0.3
Trav10A0A075B642 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav10A0A075B642 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.93■□□□□ 0.3
Trav10A0A075B642 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trav10A0A075B642 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trav10A0A075B642 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav10A0A075B642 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav10A0A075B642 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav10A0A075B642 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav10A0A075B642 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav10A0A075B642 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav10A0A075B642 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav10A0A075B642 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav10A0A075B642 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav10A0A075B642 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav10A0A075B642 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trav10A0A075B642 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav10A0A075B642 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav10A0A075B642 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav10A0A075B642 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav10A0A075B642 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav10A0A075B642 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav10A0A075B642 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trav10A0A075B642 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav10A0A075B642 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav10A0A075B642 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.91■□□□□ 0.3
Trav10A0A075B642 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trav10A0A075B642 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav10A0A075B642 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav10A0A075B642 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trav10A0A075B642 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.91■□□□□ 0.3
Trav10A0A075B642 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Trav10A0A075B642 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav10A0A075B642 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trav10A0A075B642 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav10A0A075B642 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav10A0A075B642 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Trav10A0A075B642 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.9■□□□□ 0.3
Trav10A0A075B642 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.9■□□□□ 0.3
Trav10A0A075B642 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav10A0A075B642 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trav10A0A075B642 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav10A0A075B642 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav10A0A075B642 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav10A0A075B642 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trav10A0A075B642 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav10A0A075B642 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav10A0A075B642 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav10A0A075B642 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.89■□□□□ 0.3
Trav10A0A075B642 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.89■□□□□ 0.3
Trav10A0A075B642 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav10A0A075B642 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav10A0A075B642 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trav10A0A075B642 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav10A0A075B642 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav10A0A075B642 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav10A0A075B642 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav10A0A075B642 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav10A0A075B642 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav10A0A075B642 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trav10A0A075B642 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav10A0A075B642 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav10A0A075B642 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav10A0A075B642 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trav10A0A075B642 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Trav10A0A075B642 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav10A0A075B642 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trav10A0A075B642 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Trav10A0A075B642 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.88■□□□□ 0.29
Trav10A0A075B642 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav10A0A075B642 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trav10A0A075B642 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav10A0A075B642 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav10A0A075B642 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trav10A0A075B642 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms