Protein–RNA interactions for Protein: Q9D3I8

Rhox4a, Reproductive homeobox 4A, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4aQ9D3I8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rhox4aQ9D3I8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rhox4aQ9D3I8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.55■□□□□ 0.88
Rhox4aQ9D3I8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rhox4aQ9D3I8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rhox4aQ9D3I8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Rhox4aQ9D3I8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rhox4aQ9D3I8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Rhox4aQ9D3I8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.54■□□□□ 0.88
Rhox4aQ9D3I8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rhox4aQ9D3I8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rhox4aQ9D3I8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rhox4aQ9D3I8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
Rhox4aQ9D3I8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rhox4aQ9D3I8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rhox4aQ9D3I8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rhox4aQ9D3I8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rhox4aQ9D3I8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rhox4aQ9D3I8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rhox4aQ9D3I8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rhox4aQ9D3I8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rhox4aQ9D3I8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rhox4aQ9D3I8 Amer2-203ENSMUST00000225247 2662 ntBASIC20.49■□□□□ 0.87
Rhox4aQ9D3I8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rhox4aQ9D3I8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rhox4aQ9D3I8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rhox4aQ9D3I8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.44■□□□□ 0.86
Rhox4aQ9D3I8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rhox4aQ9D3I8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Rhox4aQ9D3I8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rhox4aQ9D3I8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rhox4aQ9D3I8 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.43■□□□□ 0.86
Rhox4aQ9D3I8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rhox4aQ9D3I8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rhox4aQ9D3I8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rhox4aQ9D3I8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rhox4aQ9D3I8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rhox4aQ9D3I8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Rhox4aQ9D3I8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Rhox4aQ9D3I8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rhox4aQ9D3I8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Rhox4aQ9D3I8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.38■□□□□ 0.85
Rhox4aQ9D3I8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rhox4aQ9D3I8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rhox4aQ9D3I8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rhox4aQ9D3I8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rhox4aQ9D3I8 Mipep-204ENSMUST00000225043 1548 ntBASIC20.37■□□□□ 0.85
Rhox4aQ9D3I8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rhox4aQ9D3I8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.36■□□□□ 0.85
Rhox4aQ9D3I8 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.36■□□□□ 0.85
Rhox4aQ9D3I8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rhox4aQ9D3I8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rhox4aQ9D3I8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rhox4aQ9D3I8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Rhox4aQ9D3I8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rhox4aQ9D3I8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Rhox4aQ9D3I8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rhox4aQ9D3I8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rhox4aQ9D3I8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rhox4aQ9D3I8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rhox4aQ9D3I8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rhox4aQ9D3I8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rhox4aQ9D3I8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rhox4aQ9D3I8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rhox4aQ9D3I8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rhox4aQ9D3I8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Rhox4aQ9D3I8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.32■□□□□ 0.84
Rhox4aQ9D3I8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rhox4aQ9D3I8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rhox4aQ9D3I8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rhox4aQ9D3I8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rhox4aQ9D3I8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rhox4aQ9D3I8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rhox4aQ9D3I8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rhox4aQ9D3I8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rhox4aQ9D3I8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.28■□□□□ 0.84
Rhox4aQ9D3I8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rhox4aQ9D3I8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rhox4aQ9D3I8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rhox4aQ9D3I8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rhox4aQ9D3I8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Rhox4aQ9D3I8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rhox4aQ9D3I8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rhox4aQ9D3I8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rhox4aQ9D3I8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rhox4aQ9D3I8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rhox4aQ9D3I8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rhox4aQ9D3I8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rhox4aQ9D3I8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rhox4aQ9D3I8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rhox4aQ9D3I8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Rhox4aQ9D3I8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.23■□□□□ 0.83
Rhox4aQ9D3I8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rhox4aQ9D3I8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rhox4aQ9D3I8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rhox4aQ9D3I8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rhox4aQ9D3I8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rhox4aQ9D3I8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rhox4aQ9D3I8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rhox4aQ9D3I8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 140.4 ms