Protein–RNA interactions for Protein: Q9D3I8

Rhox4a, Reproductive homeobox 4A, mousemouse

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4aQ9D3I8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rhox4aQ9D3I8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rhox4aQ9D3I8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.55■□□□□ 0.88
Rhox4aQ9D3I8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rhox4aQ9D3I8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rhox4aQ9D3I8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Rhox4aQ9D3I8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rhox4aQ9D3I8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Rhox4aQ9D3I8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.54■□□□□ 0.88
Rhox4aQ9D3I8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rhox4aQ9D3I8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rhox4aQ9D3I8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rhox4aQ9D3I8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
Rhox4aQ9D3I8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rhox4aQ9D3I8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rhox4aQ9D3I8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rhox4aQ9D3I8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rhox4aQ9D3I8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rhox4aQ9D3I8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rhox4aQ9D3I8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rhox4aQ9D3I8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rhox4aQ9D3I8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rhox4aQ9D3I8 Amer2-203ENSMUST00000225247 2662 ntBASIC20.49■□□□□ 0.87
Rhox4aQ9D3I8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rhox4aQ9D3I8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rhox4aQ9D3I8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rhox4aQ9D3I8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.44■□□□□ 0.86
Rhox4aQ9D3I8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rhox4aQ9D3I8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Rhox4aQ9D3I8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rhox4aQ9D3I8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rhox4aQ9D3I8 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.43■□□□□ 0.86
Rhox4aQ9D3I8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rhox4aQ9D3I8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rhox4aQ9D3I8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rhox4aQ9D3I8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rhox4aQ9D3I8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rhox4aQ9D3I8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Rhox4aQ9D3I8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Rhox4aQ9D3I8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rhox4aQ9D3I8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Rhox4aQ9D3I8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.38■□□□□ 0.85
Rhox4aQ9D3I8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rhox4aQ9D3I8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rhox4aQ9D3I8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rhox4aQ9D3I8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rhox4aQ9D3I8 Mipep-204ENSMUST00000225043 1548 ntBASIC20.37■□□□□ 0.85
Rhox4aQ9D3I8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rhox4aQ9D3I8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.36■□□□□ 0.85
Rhox4aQ9D3I8 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.36■□□□□ 0.85
Rhox4aQ9D3I8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rhox4aQ9D3I8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rhox4aQ9D3I8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rhox4aQ9D3I8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Rhox4aQ9D3I8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rhox4aQ9D3I8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Rhox4aQ9D3I8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rhox4aQ9D3I8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rhox4aQ9D3I8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rhox4aQ9D3I8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rhox4aQ9D3I8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rhox4aQ9D3I8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rhox4aQ9D3I8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rhox4aQ9D3I8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rhox4aQ9D3I8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rhox4aQ9D3I8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Rhox4aQ9D3I8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.32■□□□□ 0.84
Rhox4aQ9D3I8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rhox4aQ9D3I8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rhox4aQ9D3I8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rhox4aQ9D3I8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rhox4aQ9D3I8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rhox4aQ9D3I8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rhox4aQ9D3I8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rhox4aQ9D3I8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rhox4aQ9D3I8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.28■□□□□ 0.84
Rhox4aQ9D3I8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rhox4aQ9D3I8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rhox4aQ9D3I8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rhox4aQ9D3I8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rhox4aQ9D3I8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Rhox4aQ9D3I8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rhox4aQ9D3I8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rhox4aQ9D3I8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rhox4aQ9D3I8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rhox4aQ9D3I8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rhox4aQ9D3I8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rhox4aQ9D3I8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rhox4aQ9D3I8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rhox4aQ9D3I8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rhox4aQ9D3I8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Rhox4aQ9D3I8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.23■□□□□ 0.83
Rhox4aQ9D3I8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rhox4aQ9D3I8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rhox4aQ9D3I8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rhox4aQ9D3I8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rhox4aQ9D3I8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rhox4aQ9D3I8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rhox4aQ9D3I8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rhox4aQ9D3I8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms