Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trim16Q99PP9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Trim16Q99PP9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.26■■□□□ 1.47
Trim16Q99PP9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Trim16Q99PP9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
Trim16Q99PP9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Trim16Q99PP9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.23■■□□□ 1.47
Trim16Q99PP9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
Trim16Q99PP9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.23■■□□□ 1.47
Trim16Q99PP9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Trim16Q99PP9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Trim16Q99PP9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Trim16Q99PP9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Trim16Q99PP9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Trim16Q99PP9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Trim16Q99PP9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
Trim16Q99PP9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Trim16Q99PP9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.19■■□□□ 1.46
Trim16Q99PP9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Trim16Q99PP9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Trim16Q99PP9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Trim16Q99PP9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Trim16Q99PP9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Trim16Q99PP9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.16■■□□□ 1.46
Trim16Q99PP9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Trim16Q99PP9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Trim16Q99PP9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Trim16Q99PP9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Trim16Q99PP9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Trim16Q99PP9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Trim16Q99PP9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Trim16Q99PP9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Trim16Q99PP9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.11■■□□□ 1.45
Trim16Q99PP9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Trim16Q99PP9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Trim16Q99PP9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Trim16Q99PP9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Trim16Q99PP9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC24.1■■□□□ 1.45
Trim16Q99PP9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.1■■□□□ 1.45
Trim16Q99PP9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Trim16Q99PP9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.08■■□□□ 1.45
Trim16Q99PP9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Trim16Q99PP9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Trim16Q99PP9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Trim16Q99PP9 Zfp131-205ENSMUST00000223812 663 ntBASIC24.06■■□□□ 1.44
Trim16Q99PP9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Trim16Q99PP9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Trim16Q99PP9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
Trim16Q99PP9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Trim16Q99PP9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Trim16Q99PP9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Trim16Q99PP9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Trim16Q99PP9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Trim16Q99PP9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
Trim16Q99PP9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Trim16Q99PP9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24■■□□□ 1.43
Trim16Q99PP9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
Trim16Q99PP9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Trim16Q99PP9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Trim16Q99PP9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Trim16Q99PP9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Trim16Q99PP9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Trim16Q99PP9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Trim16Q99PP9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Trim16Q99PP9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.97■■□□□ 1.43
Trim16Q99PP9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Trim16Q99PP9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Trim16Q99PP9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Trim16Q99PP9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trim16Q99PP9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Trim16Q99PP9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trim16Q99PP9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trim16Q99PP9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trim16Q99PP9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trim16Q99PP9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trim16Q99PP9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Trim16Q99PP9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trim16Q99PP9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Trim16Q99PP9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trim16Q99PP9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.93■■□□□ 1.42
Trim16Q99PP9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Trim16Q99PP9 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.92■■□□□ 1.42
Trim16Q99PP9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Trim16Q99PP9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Trim16Q99PP9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Trim16Q99PP9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Trim16Q99PP9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Trim16Q99PP9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trim16Q99PP9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trim16Q99PP9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trim16Q99PP9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Trim16Q99PP9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Trim16Q99PP9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.89■■□□□ 1.41
Trim16Q99PP9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Trim16Q99PP9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.88■■□□□ 1.41
Trim16Q99PP9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trim16Q99PP9 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.87■■□□□ 1.41
Trim16Q99PP9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Trim16Q99PP9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Trim16Q99PP9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.85■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 99.3 ms